Monodelphis domestica (gray short-tailed opossum): 103099926
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Entry
103099926 CDS
T01031
Symbol
ALMS1
Name
(RefSeq) ALMS1, centrosome and basal body associated protein
KO
K16741
alstrom syndrome protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
103099926 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
103099926 (ALMS1)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
103099926 (ALMS1)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103099926 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
103099926
NCBI-ProteinID:
XP_007477924
LinkDB
All DBs
Position
1:complement(740575382..740675875)
Genome browser
AA seq
1706 aa
AA seq
DB search
MPQKQEEQASSSESAPGDIPKSEQAEKRSVPLRIPSTTFYYKEDLKIVSERVQRLIDRWD
SELIEISAHTAPKPTLKTVSSGKEATKLTFFESKEIPVTVDKAGKVRSDLQDIKEVSEYE
SKTDKGLHSLLVEAENNARKRFSNASALRADTVSPWPSRLDDSKEPSLKKDSVGLSQRST
REETLVSTGKVETSALSYFPSQRESGRTSVEEMESKARVAMRETLRQYENARSVPRCDPG
RSGAITGHPVPLMPFVDSHSSSDISDGRVSYVWDPFLGYLPAIPSHAYMGDVRDLSDSDD
GSSDDSLAAHVEHLLKCESPVSFATQVLRSAEEEECRVRARAWNLKFNLASKYGDFMADL
DEEDMRKMEEIKASLFGCERPLDMIQGLPCPVGIRNIPETFCNHLFIEAHDKGCTRNMAN
DQSESASHGFRSKESAEANQGQSAASWSVQFASHEKPAIQSSQARAWSSSRTGSHQPFLS
STSEALYVSKVATGPFHEEAETQLVRSVGPAPGSSQEPISYPSHPSAGYSEFHRSSQGFC
DAPIVVQIDQAQSPVHASKRLTMQALKSPPTITSQALASSLRKDPVLTGIRDRVSIDLSV
TTRSFQDRGPPEAPSTKTAAELQLSTKDSWPADPRDLGRGLNAKSLGGKEQSLPSGIAPE
EHLKQYRPREVLPGESQGKPGRFSQIPFSQPPLSQPPLSQPPLSQPPLSQPPLSQPPLSQ
PPLSQPPLSQPPLSQPPLSQPPLSQHRGRIVAEQGQLKQNPRHVAGMEAEADFRIRPSSP
PLDGEVSSPFPCSSSKRAISYLRITLSPNPCSGMLNGETFLKRQHTMDAGTRTRLHNSLS
VAPCPPKPCLPVPILLCPPESTIPLPDNEFLDCLPHRSGQPLKSFSRQTQVNCSDLEAYS
HSKGVPNNDSCVTFDNSRNAYPAPPLKLSSDANTQITTTEGSEKTTISSEIFISSHIPNK
PSHGPTAQPSLLPYKPPGSTTMYYVPNSAEPLLYPVAKSDTTVESTHSGSNDAIAPDFPP
EALGTRDENVSDIVNIKHKEGIYSKKTKSAWTEEENPTTKSVAESKNQLEAENTTHSVFK
SAQFYFHHPVHHHDFFSCCEPWGRGAQLLNSRGVPGLCPSFDTFEDNNGFYPLQTEMDYT
RIESYCVNVGGSEERGARQQPDKSHEVRVPTGSPRISFSLAPTLQPSASLNDLWNRFQER
QKQQKLPASNSSKELSLVDRLDRLAKVLQKPMMLSLQTSGPAQADGSGEGTWQQQQDTGK
HKPKKDENEPHSPCELRWVSRASFVLTGRHQNRPDHPREAGADSMSLISSDSLMPEPLDT
MFESDSMTQTDGEADPMGEASSDVSMAQKVLERRHGSPRRQHRQTEGSSRGTKARSTAPQ
VRRKDIQVDSVTSLDSGSTDSSACSLHPTPRNKQNVRMLNKAVQTGELEMVRSTRKHTQD
FGVTFPTPNHNVTEKRADNYVNYSKTGSSSEEKKPLTLYLWTKKSRKSKPNCCEGVSWFI
PAENLRCASKKENQASCVRGPGPSWFASLTYSKPWRQPLREKNCQTESRVSCRLQAMSPD
LNDDKEAQRRFVKAGLQECLERNRPDFISSSGARVKRLKLITEERKLQHLLQRERDALFN
TTEQQKVSQDFACFLSKKGHVTSRNRTITKKEMVQRSKRMYEQLPEVRKKREEEQRRSAY
TAYRFKAQLYKMKITNRVLGRKIPWD
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaagcaggaggagcaggcctctagctcagagagtgcccctggtgacatcccc
aagtctgagcaagctgagaagagatcggtgcccctaaggattccttccacaactttctat
tataaggaggatttaaaaattgtttctgaacgtgtccaaaggctcatcgatcgttgggat
tcagagctcattgagatcagtgcccacactgcccctaagcctaccctgaagactgtgagt
agtggtaaggaggcaaccaagctcaccttttttgaaagtaaggagatacccgtgactgtc
gataaagcagggaaggtcaggtcagaccttcaggacattaaggaggtatcagagtatgaa
tccaaaacagacaaagggctccactccctcctggtggaggcggagaacaatgcgaggaag
cgattcagcaatgcctcagctcttcgagctgacaccgtgtctccttggcccagcaggctg
gacgactccaaggagccctctttgaagaaggactcggtgggcctttcccagaggtcaacg
agggaagaaaccctggtctccactgggaaggtggagacaagtgccctcagttatttccct
tctcagagagagtctgggagaacttctgttgaggaaatggagagtaaggcccgagtggcc
atgagggagaccctcagacagtacgaaaacgcccggtcggtgccaaggtgtgatccgggc
agaagtggtgccatcactgggcatccagtgcctctgatgccttttgtagatagccattca
agtagtgacatcagtgatgggagagtttcctatgtctgggacccctttttgggatacctg
ccagccatccccagccatgcatatatgggagatgtccgggatctgtctgatagtgatgat
ggcagcagtgatgactccttggctgcccatgtggagcatcttctcaagtgcgagtcccct
gtgagctttgccacacaggtgctgcggagtgcagaggaagaggagtgcagagttcgtgca
cgtgcttggaatctcaagtttaacctggcttccaagtatggggacttcatggcggatctg
gacgaagaagacatgaggaagatggaggagatcaaggctagcctgtttggctgtgagagg
ccactggacatgatccagggtttgccgtgcccggtggggataagaaatatccctgaaaca
ttttgtaatcatctctttattgaagctcatgataaaggctgcaccagaaatatggccaat
gaccaatctgaaagcgcttctcatggcttcagatctaaggagtctgcagaggcgaatcaa
ggacagtcagcagcatcttggagtgtgcagtttgccagccatgaaaagccagctatccaa
agctctcaggcaagagcgtggagctcttctaggacgggaagccaccagccattcttgagc
tccacatctgaggctctttatgttagcaaggtggcaacagggccattccatgaagaggca
gagacacagctggtgagatctgtgggacctgcccccggatcctcccaagaacccatcagt
tatccatctcatccgtctgcgggctactccgagttccacagaagctcccagggcttctgt
gatgctccgattgtggttcagattgaccaagcgcaaagccctgtccatgcctccaagaga
ctgactatgcaggcactgaagagccctcccacaattacaagccaagccctggcaagttcc
ctaaggaaagatccagtgctcacaggaattcgtgatcgggtatccattgatttgtctgtc
accacaagaagctttcaagacagaggaccaccagaagcaccatctactaaaactgcggct
gagctccagctcagtaccaaggacagttggcctgctgacccccgggaccttggtagaggc
ttgaatgccaagtcacttggaggaaaggagcaaagtctcccttctggcattgcccctgag
gagcatctgaaacagtaccggcctcgggaagtcctgcctggagagagccaggggaaacct
ggacgcttctcccagattcctttttcccagcctcctctttcccagcctcctctttcccag
ccacctctttcccagccacctctttcccagccacctctttcccagccacctctttcccag
cctcctctttcccagccacctctttcccagccacctctttcccagcctcccctttctcag
cctcccctttcccagcatcgcggccgtattgtggcagaacagggtcagctgaagcagaac
ccacgtcatgtagcaggcatggaggcagaggcggacttcaggatacgtccaagctcccca
cctctagatggagaagtgtcttctccatttccatgctcttcaagcaaaagggccatctct
tatcttcggattacactctcccccaacccttgcagtggcatgctgaatggggagaccttc
ctgaaaaggcagcacacgatggatgctggcactagaacaagacttcataattcactgagt
gtggccccatgtcccccaaagccttgcttgcctgtgcctatactgctgtgccctccagaa
tcgaccataccgctaccagataacgagttcttagattgtctacctcacaggagtggccag
cccttgaaatctttttcaaggcaaacccaagttaattgttcagatttggaggcttactca
cattcgaaaggagtgccgaacaatgatagctgtgtaacattcgataactccaggaatgca
tatcctgcccctcctctcaagttatcatcggatgccaacactcagataacaacaactgag
ggttcagaaaagaccacaatttcatcagagatttttattagttctcacatccctaacaag
ccatctcatggcccaactgcccagccttcactgctgccatacaagcctcctggaagcacc
accatgtattatgttccaaactcagcggagccacttctgtaccctgtggccaaatccgat
accactgtggagagcacccattcagggtccaatgatgctattgctccagatttcccccct
gaggctcttggcacaagggatgaaaatgtgtctgacattgtaaacatcaaacataaagag
ggaatctatagcaagaagactaagtcagcctggactgaagaagaaaatcccactacaaaa
agtgtggcagaatccaagaatcagttggaagctgaaaacacaactcattctgtcttcaag
tcagcccagttttactttcaccatccggtccaccatcacgatttcttctcctgctgtgag
ccctggggaaggggcgctcagctgcttaactccagaggagtccccgggctctgtccttct
tttgatacttttgaagacaacaatgggttctacccgttacagaccgaaatggattacacc
agaatagaaagttactgcgtgaacgtagggggctctgaagagcggggggcccggcagcag
cccgacaagagtcatgaagtcagagttcccacagggagcccgaggatcagcttctcgcta
gccccgacgctccagcccagcgctagtctgaatgacctctggaacaggtttcaggagcga
cagaagcagcagaaactgccggcttccaactcctccaaagagttgtccttggttgaccgt
ctagatcgcctggccaaggtccttcagaagcccatgatgctttctctgcagacttctggg
cctgcccaggctgatggcagcggggagggcacctggcagcagcagcaggacacagggaaa
cacaagccaaagaaggatgaaaatgaaccccactctccctgtgaattgagatgggtctcc
cgggcttcgtttgtcctgaccgggcgtcatcagaacaggcccgaccatcccagagaggca
ggggctgattccatgagcctcatctcttcagactcactcatgccagagcccttggacacc
atgtttgagtctgactcgatgacccagaccgatggagaagcagacccgatgggtgaggca
agcagcgatgtatccatggcccagaaagtcctggaaaggaggcatggatcccccagacgg
cagcacaggcagacggaggggagcagtagaggaacaaaggctcgatcaaccgcccctcag
gtcagaagaaaagacattcaggtggattctgtcacttccttggactctggctcgactgac
agtagtgcttgcagtctacaccctactcccaggaataagcagaatgtccggatgttaaat
aaggctgttcaaacaggggaattggagatggtgagaagtacaaggaagcatactcaggat
tttggggtgacttttccaaccccaaatcataacgtgactgaaaagagagcagacaattat
gtgaactattcaaagacaggaagcagttctgaagaaaagaagcctctgactctgtacctg
tggaccaagaagtcaaggaaaagtaaacctaattgttgtgaaggggtttcctggtttatt
cctgcagaaaacttgagatgtgcctctaagaaggagaatcaggccagttgtgtccgtggc
cccggcccctcctggttcgcctctctcacttacagcaagccctggaggcagccccttcga
gaaaagaactgccagaccgagagcagagtgagttgtcgcctccaagccatgtcgcccgat
ctcaatgatgataaggaggcccagagacgatttgtgaaggcgggcctgcaggagtgcctg
gagaggaaccgtcctgacttcatctccagctcgggagcccgggtgaagcggctgaagtta
atcacagaggagaggaaactgcagcatttgttacagagggagcgagatgccttgttcaac
acgactgagcagcagaaggtgtctcaggattttgcctgctttctctctaagaaaggtcac
gtgacttcgaggaacaggacaattaccaagaaggaaatggtgcaacgctcaaaaaggatg
tatgagcagcttcctgaggtgaggaagaagagggaagaagagcagaggaggtcggcctac
actgcctaccgctttaaggctcagctctacaaaatgaaaatcaccaaccgtgtcttaggg
agaaaaatcccctgggactga
DBGET
integrated database retrieval system
