Methylorubrum extorquens AM1: Mex_1p2394
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Entry
Mex_1p2394 CDS
T00921
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00521
Streptomycin biosynthesis
mea00523
Polyketide sugar unit biosynthesis
mea00541
O-Antigen nucleotide sugar biosynthesis
mea01100
Metabolic pathways
mea01110
Biosynthesis of secondary metabolites
mea01250
Biosynthesis of nucleotide sugars
Module
mea_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Mex_1p2394 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Mex_1p2394 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Mex_1p2394 (rfbC)
Enzymes [BR:
mea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Mex_1p2394 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACS40177
UniProt:
C5AQT0
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All DBs
Position
2466168..2466719
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AA seq
183 aa
AA seq
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MQVIDTEIPAVKRVIPKRHGDDRGWFSEIYRADILSEHGIANAFVQDNQSFSAPAGTIRG
LHFQVAPNAQAKLIRVLAGAILDVAVDLRSDSPSYGRHVAVRLDATGGEQLFVPAGFAHG
FCTLEPDTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADAILSGKDKAAPLLADLG
RVF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcatcgatactgaaattccggcggtcaaacgggtgatcccgaagcgccacggc
gacgaccgcggctggttctccgagatctaccgggccgatatcctgtccgagcacgggatc
gccaatgccttcgtgcaagacaaccaatccttctccgcgcccgccggcacgatccggggc
ctgcacttccaagtcgcacccaacgcccaggccaagctgatccgggtgctcgccggcgcg
atcctcgatgtcgccgtcgatctgcgctccgactccccgagctacggccgccacgtcgcc
gtgcggctcgatgcgaccggcggcgagcagcttttcgtgcccgccggctttgcccatggc
ttctgcaccctggagccggacaccatggtcgcctacaaggtcgacgcctattacagcccg
gccgacgaccggaacctgcgctggaacgatccggcgatcggcatcgcgtggccggtggcc
gaagcggatgcgatcctctcgggcaaggacaaggctgcgccgcttctggccgatctcggg
cgggtgttctga
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