KEGG   Methanonatronarchaeum sp. AMET-Sl: QEN48_01030
Entry
QEN48_01030       CDS       T09224                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
meae  Methanonatronarchaeum sp. AMET-Sl
Pathway
meae03030  DNA replication
meae03410  Base excision repair
meae03420  Nucleotide excision repair
meae03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QEN48_01030
   03410 Base excision repair
    QEN48_01030
   03420 Nucleotide excision repair
    QEN48_01030
   03430 Mismatch repair
    QEN48_01030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meae03032]
    QEN48_01030
   03400 DNA repair and recombination proteins [BR:meae03400]
    QEN48_01030
Enzymes [BR:meae01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     QEN48_01030
    6.5.1.6  DNA ligase (ATP or NAD+)
     QEN48_01030
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     QEN48_01030
DNA replication proteins [BR:meae03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    QEN48_01030
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     QEN48_01030
DNA repair and recombination proteins [BR:meae03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     QEN48_01030
   NER (nucleotide excision repair)
    Other NER factors
     QEN48_01030
   MMR (mismatch excision repair)
    Other MMR factors
     QEN48_01030
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: WGI17622
LinkDB
Position
216635..218389
AA seq 584 aa
MSSLLFSDLIDVFLRLEETRSRNEMTDILVDLYEITPSSDVGIVSYLVLGQIDADYKDVK
LGLGDKMVAESLSIASSRSKKEIQEMYREEGDLGTVAEKVSSSTKNLNQFLDEEKDLLVQ
EVYQGLKDISSFEGDGSHDRKIRRLAGLITQASGDGARFLTRIALGKLRLGVGAMTLLDA
LAKTYSGSDENRPEVEHAYNISSDIGLVAEKLSKNGLKGLNQIDVEVGRPIRMMLAQRLE
KLEDIKDKIEGRFAAEVKYDGERMQIHKSGDNIQIFSRRLEDITNQYPDVVRSIRRSVGS
EDVIIEGEAVATKDGELQDFQTLMQRKRKYDVEQYVEKIPVKLFLFDMLYKNKSLLNQPF
SVRRKKLQQTIQTKDKLELSKLTTTQEISEVESFFQQAVDRGQEGIMLKSCGEDSVYRAG
ARDWQWIKWKKDYQTSMSDTVDLTVIGGFAGKGRRSGLYGTLLCAAYNKEKDIYQTVCKV
GTGFTDQDLEQLPNLLQPHKTKRKPARVESDITPDQWIQPNIVVEILGAELTKSPVHTAA
RNKKDKKGIAIRFPRYIKLRQDKGPTDSTTTQELKQMYKKQKNN
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgagttctctattgttcagtgatttaattgatgtttttttaaggcttgaggaaactcgg
tccagaaatgagatgaccgatatccttgtagacctctatgaaataactcctagctctgat
gtagggattgtttcttatttggtgttggggcagattgatgccgactacaaggatgttaag
cttggtttaggagataagatggttgccgaatccctatccatcgcttcatcccgctctaaa
aaagaaatacaagagatgtatcgagaagaaggggatttgggtactgttgctgaaaaagta
tcaagctccaccaaaaacctcaaccaatttctagatgaagaaaaggacctgttggttcaa
gaggtctaccaaggcctgaaagacataagtagtttcgaaggagatggttcccacgaccga
aagatacggagattagccggcttaataacccaggccagcggggatggcgctcgcttcttg
acaagaatcgctttaggtaagctacgtctaggtgttggagcgatgacattgctagacgca
ctagccaaaacctatagcggtagtgatgaaaaccggcctgaagtagaacacgcatacaac
atcagcagtgacatcgggttggttgcagaaaaactaagcaaaaacggcctcaaaggcctc
aaccaaatagatgtagaggtaggtaggccaattcgaatgatgttggcacaacgactcgaa
aaactagaagacataaaagataagattgaaggtaggtttgcagccgaagttaaatacgat
ggagaacgaatgcaaatccataaatcaggtgacaatatacagattttttctagacgactc
gaagacatcaccaatcaataccccgatgtcgtcagatctattcggaggtctgttggttct
gaagatgttattattgagggagaggcagttgcaaccaaagatggagagttacaggatttc
cagacattgatgcagaggaaaagaaaatatgatgtagagcagtatgttgagaaaatccct
gtaaaactattcttattcgacatgctctacaaaaacaaaagcctactaaaccaaccattc
tctgtaagaagaaaaaaactacaacaaacaatccaaacaaaagacaaactagagctatcc
aaactaactaccacccaagaaataagtgaagttgaaagtttctttcagcaggcagttgac
cggggtcaagagggtattatgcttaaatcatgtggagaggactcagtctacagggcaggg
gcgagagactggcagtggattaaatggaaaaaagactaccaaaccagtatgtcagacacc
gtcgacctaacagtaattgggggtttcgctggaaaaggccgccgctccgggttatacgga
acattactctgcgcagcatacaacaaagaaaaagatatctaccaaacagtctgcaaagtc
ggcacaggcttcacagaccaagacctagaacaactaccaaacctactacaaccacacaaa
accaaaaggaaaccagccagagtagaatcggacatcacaccagaccaatggatacaaccc
aacatagtagtcgagatactcggagccgaactaacaaaaagccccgtacacaccgcagcc
agaaacaaaaaagacaaaaaaggaatagcaataagattcccaagatacataaaactaaga
caagacaaaggaccaacagactcaacaaccacccaagaactaaaacaaatgtacaaaaaa
caaaaaaacaattaa

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