Methylophaga frappieri: Q7C_1247
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Entry
Q7C_1247 CDS
T02056
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mec
Methylophaga frappieri
Brite
KEGG Orthology (KO) [BR:
mec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mec03009
]
Q7C_1247
Enzymes [BR:
mec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q7C_1247
Ribosome biogenesis [BR:
mec03009
]
Prokaryotic type
rRNA helicases
Q7C_1247
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Phage_integrase
SNF2-rel_dom
RsdA_SigD_bd
DUF2986
Motif
Other DBs
NCBI-ProteinID:
AFJ02397
UniProt:
I1YHK4
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All DBs
Position
1275427..1276659
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AA seq
410 aa
AA seq
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MPFEVIEMQFDDLFLDDALLDALQRQGFTHATMVQQTAIPALLSGQDVLACAATGTGKTA
AFVLPILQKLMDEPNTSGKAQFLIFAPTRELAFQIQHVFHQLGSAFKPIITMLTGGASPW
AQVQHAETAGADIIIATPGRILSLVNSHSIDLTGIEMVVIDEADRMLDMGQGPDVLHSLA
KIGHPFQAGLFSATLAGSGVRLFAESLLKDPQEILLQAANQQAQNVTQEVYLCDNQEHKQ
AILLSFLAQEDCTRALVFCNKKIRAESVCDFLQSQNISAQLLHGDFDQSVRRERIRKFRS
GQIRVTVATDVAARGLDVADISHVINYDVPFRGDAYIHRIGRTGRADKYGLAINLVEPHD
HKNLQRIEHHVGGKLPIRKRKGLAPKSKSNKAFSKPKNKPRYIAKKERQG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgccatttgaagtgatagaaatgcaatttgatgatttattcctagatgatgccctgctg
gatgcactccagcgccaaggtttcactcatgcaacgatggtgcaacaaacagccatacca
gctctgctatccgggcaggatgttttagcctgtgcggcgacaggtacgggaaaaacagcg
gcctttgtgctacccattttgcagaaattgatggatgagcctaataccagtggcaaggcg
caatttttgatttttgcaccaacacgtgaattagccttccaaattcaacatgtctttcac
caacttggcagtgcattcaaacccatcattacgatgttgaccggtggcgcctcaccttgg
gcgcaagtgcagcatgcagagacagctggcgccgatattattattgccacaccaggccga
atcttaagtctggtcaatagtcattccattgatttgactggcattgaaatggtcgtcatt
gatgaggctgatcgcatgttggatatgggacagggaccggatgtcctgcatagtctcgcc
aaaataggtcacccatttcaggccggattattttccgccacactcgctggcagtggggtt
cgcttgtttgcagagtccttattaaaagacccacaagaaattcttttacaggcggccaat
cagcaggctcaaaatgtcacgcaagaagtctatctctgcgacaatcaggaacataagcaa
gcaattttgttgtcatttctggctcaggaggattgcacaagagccctagtcttttgtaat
aaaaaaatacgtgctgagtcagtttgtgactttttacaatcccagaatatctctgcgcag
ttattgcatggcgattttgaccaatccgtgcggcgggaacgaattcgcaagtttcgaagc
ggtcaaatccgggttacggttgccacggatgtcgcggcgcgcggtctggatgtagccgat
atcagtcacgtcatcaattatgatgtgccatttcgaggtgatgcctatatccatcgcatt
gggcgtacaggccgtgccgacaaatatggcctcgccatcaacttggtggaaccgcatgac
cataaaaatctgcaacgaattgaacaccatgttggtggcaaattacctattcgaaaacgt
aaaggccttgcgccgaaaagtaaaagcaacaaagccttctcaaagccgaaaaacaagcca
cgctatatagctaaaaaagagcgccaaggttaa
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