Methylocapsa sp. D3K7: QEV83_15450
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Entry
QEV83_15450 CDS
T08996
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEV83_15450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_15450 (uvrB)
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEV83_15450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEV83_15450 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
SWI2_SNF2
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WGJ14038
LinkDB
All DBs
Position
3267214..3269739
Genome browser
AA seq
841 aa
AA seq
DB search
MAKAPKPAAGKKAPHSKASRPEVTPLGEHLAALLNPALNERQLGVSEAQANYDSGFYRPP
GTGGVAATAESLKELLERGDPNIREKSPWTPHRPPRPDKSEGGQRFRVSSEFEPKGDQPA
AIDELVKGITAQERDQVLLGVTGSGKTFTMAQVIARTNRPALVLAPNKTLAAQLYGEFKS
FFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRSLLERDDVIIV
ASVSCIYGIGSVETYTAMTFTVKLGEKIDQRQLIADLVALQYKRSAGDFSRGVFRVRGDT
IELFPAHYEDRAWRIGFFGDSIETIAEFDPLTGRKAQDLEFIKVYANSHYVTPRPTLLQS
IKGIKIELKQRLAELNAAGRLLEAQRLEQRTMFDLEMLETAGSCAGIENYSRYLTGRRPG
EPPPTLFEYLPDNALVFTDESHVTIPQIGAMYRGDFRRKATLAEYGFRLPSCLDNRPLRF
EEWDAMRPQSIHVSATPSSWEMERAGGVFVEQIIRPTGLIDPPVEIRPARAQVDDLLGEV
REVAAKGYRSLVTVLTKRMAEDLTEYLHDHGVRVRYMHSDIDTIERIEIIRDLRLGAFDV
LVGINLLREGLDIPECALVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADRETG
SMTRALAETSRRREKQQAYNAENGITPASIKRGIADILGSVYEQDHVTVDAGLSAPEMLA
GHNFKAAIADLEKRMRDAAANLEFEEAARYRDELKRLQAVELAIADDPLASQRDVESQAG
SFQGERKYGRAANLPASRPHKPTDAEMGPHNFGGGEAKPRENGRPRSSGGKGGTSWKGKR
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctccgaaacccgccgcgggaaagaaagccccgcattcgaaagcctcgcgg
cccgaggtcacgccgcttggcgagcatcttgccgccttgctcaatccggcactaaacgag
cgccagcttggcgtttcggaggcgcaggccaattatgattcaggtttctaccggccaccg
gggacgggcggcgtcgcggcgaccgccgaatcgctgaaagagctgctggagcgcggcgac
ccgaatatccgcgaaaaaagcccctggacgccgcaccggccgccgagacccgacaaatcg
gaaggcggccaaagatttcgcgtctcctccgaatttgagccgaagggcgaccagcccgcc
gccatcgatgaactcgtaaagggcatcaccgcgcaggaacgcgaccaggtactgctcggc
gtcaccggctcgggcaagactttcaccatggcgcaggtgatcgcccgcaccaaccgtccg
gcgctggttctcgcgcccaataaaaccctggcggcgcagctttacggtgagttcaaaagc
ttctttccggacaacgcggtcgaatatttcgtctcttactatgattactatcagccggaa
gcctatgtgccgcgttccgacacctatatcgagaaagaaagctcgatcaacgagcagatc
gaccggatgcgccatgccgcgacgcgctcgctgttggagcgcgacgatgtgatcattgtt
gcctcggtttcctgcatctacggcatcggctcggtcgaaacttatacggcgatgacattc
accgtgaagctcggcgaaaaaatcgatcagcggcaactcatcgccgatttggtcgcgctg
caatataagcgctcggcgggcgatttttcgcgcggcgtcttccgggtgcgcggcgatacc
atcgagctgttcccggctcactatgaagaccgcgcctggcgcatcggcttctttggtgat
tcgatcgaaaccatcgccgagttcgatccgctgaccggcagaaaagcccaagacctcgaa
ttcatcaaggtctatgccaactcgcactatgtgacgccgcgcccgacgcttttgcaatcg
atcaaaggcatcaagatcgaactgaaacagcgccttgccgagctcaatgccgccggccgc
ttgctcgaagcgcagaggctcgagcagcgcaccatgttcgacctcgaaatgctggagacg
gcggggtcttgcgctggcatcgagaactattcgcgctatctgaccggccgccgtcccggc
gagccgccgccaacgctcttcgaatatttgccggacaatgcgctggtcttcaccgacgag
tcgcatgtcaccattccgcagatcggcgccatgtaccgcggcgacttccggcgcaaggcg
acactcgccgaatatgggttccggctgccgtcgtgtctcgacaacaggcctttgcgcttc
gaggaatgggacgcgatgcggccgcagtcgatccatgtctcggcgacacccagctcttgg
gaaatggagcgcgcgggcggcgtcttcgtcgaacagatcatccgccccaccgggcttatc
gatccgccggtcgaaatccggcccgcgcgtgcgcaagttgacgatcttttgggagaagtg
cgcgaggtggcggcaaaaggctaccgcagtcttgtcaccgtgctcaccaagcgcatggcg
gaagacctcaccgaatatctacatgaccatggcgttagagtgcgctacatgcattccgac
atcgacacgatcgagagaatcgaaatcatccgcgatttgcggctcggtgctttcgatgtg
ctcgtcgggatcaatcttttgcgcgaggggctggatattcccgaatgcgcccttgtcgcg
attcttgacgccgataaggaagggtttttgcgcagcgaaacatcgctcgtgcagacgatt
ggccgcgctgcgcgtaatgtcgatggcaaggtgatcctttatgccgaccgcgaaaccgga
tcgatgacgcgtgccctcgccgagacgagccgcaggcgtgaaaaacagcaagcctacaat
gccgaaaatgggatcacgcccgcctcgatcaaacgcgggatcgcggatattctgggctcg
gtctatgagcaagaccatgtcacggtcgatgcgggtctttcggcgccggagatgcttgcc
gggcataatttcaaggcggcaatcgccgatctcgaaaagcgcatgcgggacgccgccgcc
aatctcgaattcgaggaggccgcgcggtatcgtgacgaattgaaacgcctgcaagcggtt
gaactcgccatcgccgatgatccgctggcaagccagcgcgatgtcgaatcgcaggccgga
tcttttcaaggcgagcgcaaatatggacgcgcggcgaacctgccggccagccgtccgcat
aaaccgaccgatgccgagatggggccgcataattttggcggcggcgaagccaagccgcgc
gagaatgggaggccgcgttcatcggggggcaagggcgggacaagttggaaggggaagcgg
cgataa
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