Methylocapsa sp. D3K7: QEV83_15645
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Entry
QEV83_15645 CDS
T08996
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
medk
Methylocapsa sp. D3K7
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
medk03016
]
QEV83_15645
Enzymes [BR:
medk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QEV83_15645
Transfer RNA biogenesis [BR:
medk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QEV83_15645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WGJ14072
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All DBs
Position
complement(3307546..3308160)
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AA seq
204 aa
AA seq
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MSITFHKGDLPDDADFGDCVAIDTETQGLVLHRDRLCVVQLSRGDGSADVVQIAAGQTRA
KNIERLLADPNVTKLFHYARFDVAVLFKTFGVMAAPIYCTKIASKLVRTYTDRHGLKDLT
RELLGVDLSKQQQCSDWGGDTLSEAQLSYAASDVLYLHALRLRLDVMLQRENRARIAKAC
FDFLPERARLDLMGWADADIFSHE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcacatttcataagggcgacctgccggacgatgccgatttcggcgattgcgtg
gcgatcgacaccgagacccaaggtctcgttctgcatcgcgaccggctttgcgtggtccaa
ttgtcgcgcggcgatgggtccgccgatgtcgttcaaatcgcggcggggcagacgcgggca
aaaaatatcgaacggcttctggccgacccgaacgtcaccaaactgttccattacgcgcgc
ttcgatgtcgcggttctgttcaagaccttcggcgtcatggcggcgcccatttactgcacg
aaaatcgcctccaagctcgtgcgaacctacaccgaccggcatggcttgaaggatttgacc
cgagaattgctcggtgtggacttgtcaaaacagcagcaatgttccgattggggcggcgac
acgttgtcggaggctcagctttcctatgcggcgtccgacgtgttgtatttgcatgctttg
cgtctgcgcctcgacgtcatgctgcaacgcgaaaaccgcgcccgcattgccaaggcttgt
ttcgatttcctgccggaacgtgcacgcctcgacctcatggggtgggcggatgcggatata
ttctcgcatgaatag
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