Mycoplasmopsis edwardii: NCTC10132_00011
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Entry
NCTC10132_00011 CDS
T07092
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
medw
Mycoplasmopsis edwardii
Pathway
medw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
medw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10132_00011 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medw03400
]
NCTC10132_00011 (uvrB)
DNA repair and recombination proteins [BR:
medw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10132_00011 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10132_00011 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
AAA
AAA_7
P-loop_SecA
AAA_30
Viral_helicase1
NIF
ANF_receptor
UB2H
AAA_33
DUF87
Motif
Other DBs
NCBI-ProteinID:
SYV96681
UniProt:
A0A3B0Q8D3
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All DBs
Position
1:5297..7276
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AA seq
659 aa
AA seq
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MKIFKLNSEYKPSGHQPEAIEFLTKGIKTNQEHQVLHGVTGSGKTFTIANIIENFDRPVL
ILSHNKTLASQLYSELKGFFPENAVEYYISYFDYFRPEAYISSTDTYIEKDSKTNQQIEI
LRMSTINSLLTRKDVIVVASVSAIYGALNPEIYAESFFRFFKTQEISIKDFARKLINIKY
ERNDIAPLPGQFTIKGDSVLIRPADSEESAIRVDFFGDEIEEISLVDALTKDVQKTFSNY
VLSPGDAYATDNSVYDNIIPLIEEELKEQLDKFQKENKLLESQRLSQRVKNDIEDMREFR
MCKGIENYSMYLDGRTFGDRPYTLLDYFPKDSLIFIDESHLTIPQLNAMISGDQSRKNSL
VNYGFRLPSTLENRPLYLKEFEEEFSFKKIYVSATPAEYEINKSQENIFKMFVRPTGLMD
PKITIKPTKNQIDDIYETIIKQRENNARTIILTTTKESSEKLSEYMQKRNVKAAYIHSEH
TIFQRNEIIRKLRLGFYEIVIGINLLREGIDIPEVSKVIILDADKGGFMRSETNLIQIVG
RASRNAQGEAILYADTISAAMQKCIDDNEYKRKIQSEYNKAHNIEPKTIIKKIPDIIEGR
DILNAVDLIISKKQKTKSVNKEKIIEDLTKQMLKAAKERDYTRAQEIKDLIFELESEGK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttaagttaaactcagaatataaaccttctggacatcaaccagaagccata
gaattcttaacaaaaggtattaaaaccaatcaagaacaccaagttttacatggtgtaaca
ggttctggtaagacttttaccatagcaaatatcatagaaaactttgatagaccagtttta
atactttcacataacaaaacactagcaagtcaactttatagtgaactcaaaggttttttt
ccggaaaatgctgttgaatactatatttcatattttgattattttagacctgaagcatac
atatcaagtacagatacatatatagaaaaagactctaaaactaaccaacaaattgaaatc
ttaagaatgagcacaattaattctttactaactcgtaaagatgtcatagttgtagcttca
gttagtgctatttacggtgcattaaaccctgaaatttatgcagaaagctttttcagattt
ttcaaaactcaagaaatttcaatcaaagattttgcaagaaaacttattaatatcaaatac
gaaagaaatgatatagcaccattaccaggtcaatttactataaaaggtgatagtgtttta
ataagacctgctgattcagaagaatcggctatcagagtagatttttttggtgatgaaata
gaagaaatttccctagtagatgcattaacaaaagatgtccaaaaaacttttagtaattat
gttttatcccctggtgatgcttatgcaactgataattcagtttatgacaatattatcccc
ttaattgaagaagaactaaaagaacagttagataagtttcaaaaagaaaacaaattatta
gaatcacaaagactttcacaaagggttaaaaatgatattgaagacatgcgtgaatttaga
atgtgtaaaggtatcgaaaactattcaatgtaccttgatggtagaacttttggagatcgc
ccatatactttattagattactttcctaaagactcactaatttttatcgatgaatcacat
ttaaccattcctcagttaaatgcaatgattagtggtgatcaatcaagaaaaaacagttta
gtaaattatggatttagattaccttcaactttagaaaatcgaccattatacttgaaagaa
tttgaagaagaatttagctttaaaaagatttatgtttcagctacccctgctgaatatgaa
atcaacaaatcacaagaaaacatcttcaaaatgtttgttcgtccaacaggtctaatggat
cctaaaatcacaattaaaccaactaaaaatcaaattgatgatatatatgaaacaataatt
aagcaaagagaaaataatgctagaactattattttaacaacaactaaagaatcatccgaa
aaattatctgaatacatgcaaaaaagaaatgttaaagcagcatatattcactcagagcac
accattttccaacgtaatgaaatcataagaaaacttagattaggtttttatgaaattgtt
attggaattaacttactacgtgaaggaattgatattccagaggtgtctaaagtaattata
ttagatgctgacaaaggtggttttatgcgtagtgaaactaacttaattcaaattgtaggt
cgtgcatctagaaacgcacaaggtgaagctattttatatgcagacaccatttctgcagcg
atgcaaaaatgtattgatgataatgaatataaacgtaagattcaatcagagtataacaaa
gcacacaatatagaaccaaaaactattattaaaaagatccctgatattattgagggaaga
gatatacttaatgctgttgacttaattataagtaaaaaacaaaaaacaaaatctgtcaat
aaagaaaaaattatcgaagatttaacaaaacaaatgctcaaggcagctaaagaaagagat
tacacgagagctcaagaaattaaagatttaatttttgagttagaaagtgaaggaaaataa
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