Megasphaera stantonii: DKB62_02640
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Entry
DKB62_02640 CDS
T05599
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meg
Megasphaera stantonii
Pathway
meg03410
Base excision repair
meg03430
Mismatch repair
meg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DKB62_02640 (recJ)
03430 Mismatch repair
DKB62_02640 (recJ)
03440 Homologous recombination
DKB62_02640 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_02640 (recJ)
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DKB62_02640 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DKB62_02640 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DKB62_02640 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Toprim
Motif
Other DBs
NCBI-ProteinID:
AXL20554
UniProt:
A0A346AXG1
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All DBs
Position
complement(538074..540053)
Genome browser
AA seq
659 aa
AA seq
DB search
MKKRWRVIPADEGCARSLSEQLHISPILAQLLVHRGITSAECGRHFLYDSLEQSCDPFLM
KGMEKAVQRICRAIEGKEKIIIYGDYDVDGITATSLLYWVLSDLGAEPSFYIPERQSEGY
GLNRDAVQHLKDEHTNVLITVDCGISSYDIVDSFRGDMDIIVTDHHEPPADIPPAYAVLN
PKQEGCAYPFKELAGAGVAYKLCQALWLRLCGEALAGYTEIAALGTIADLVPLTGENRII
VRDGLQRMKEGYNTGLQALLAVSGLTPDSISAGRIAFTAAPRLNAAGRISHAEKGVRLLL
ETDQEKAGRIAEELNELNKERQDIEHDIARQAVQQIEAEKRRDDGVLVAYGQDWHAGVIG
IAASRLVEEYYRPSLVISVHDGVGKGSCRSIAGFNMYEALQYADDLLIQYGGHPMAAGFS
IQADRIEEFRRRLIDYAAAHMKEEDYIPQLAVDGELRPDDITLSLVDELSQLEPYGMGNS
RPVFSLQGCTVDEARPIGRDKKHLRLVLRSGKHTRISGVGWSMAEACNEIMEGDCIDVAF
QLERNEFNGVASPQLVVQDLRGPDIPVHLDRTVMIDIYLALKKCIPEWGMPVWQVQQRAL
AAEGDRYEAHAIYAAILVLKEIGVLKIRSDVDGPSYYFPVLSGKMCLHMSPTYQKYSKT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagatggcgcgtcattccggcagatgaaggctgcgcgcgctcattgtctgaa
caactccatatatcacctatactggcgcagcttctggtacatagaggtatcacctcggca
gaatgtgggcgccattttctctatgattcgctggaacagagctgcgacccttttttgatg
aaagggatggaaaaggcggtgcagcgcatctgccgggccatagaagggaaagagaagatt
atcatttacggagattatgacgtagacggcattacggctacgtcgcttctgtattgggtc
ttgtcggatttgggcgccgagccctctttttatataccggaacggcagagcgaagggtac
ggcctcaaccgggatgccgtacagcatttgaaggacgagcatacgaatgtgctgattacg
gtggactgcggtatttcctcctacgatattgtcgattccttccgcggcgacatggatatc
atcgtgacggatcaccacgagccgccggcagacataccgccggcctacgccgtgctgaat
cccaagcaggaaggctgcgcctatccgtttaaggagctggccggcgccggcgtggcttac
aagctgtgccaggccttgtggctccgcctgtgcggcgaggccctggccgggtatacggaa
atcgccgccttagggactatcgccgatttagttcccttgacgggggaaaaccgcatcatc
gttcgcgacggactgcagcggatgaaagaaggctataatacgggccttcaggcgctgctg
gccgtatcgggcctgacgccggattcgatcagcgccggccgcatcgcttttacggcggcg
ccgcgcctcaacgccgccggccgcatcagccacgccgaaaagggcgtgcgccttttgctg
gaaacggatcaagaaaaagccgggcgcattgccgaagagctgaacgagctgaataaagaa
cggcaggatatagaacacgacatcgcccgtcaggcggtacagcagattgaagcggagaag
agaagggacgacggcgtgctcgtcgcctacgggcaggactggcatgccggcgttatcggc
atcgcggcgtcgcggctggtagaagagtattaccggccgtcgctggtcatcagcgttcac
gacggcgtcggaaagggctcgtgccggagcattgccggctttaatatgtacgaagcgctg
cagtatgccgacgacctgctgattcaatacggcggccatcccatggcggctggattttcc
atacaggccgaccgcatcgaggagttccgccggcgcttgatagactatgcggcggcccat
atgaaggaagaagattatatcccgcagctggctgtggacggagaactgcggcccgatgat
attaccctgtctctggtcgacgagctgagccagctggagccctacggcatgggcaacagt
cgccccgtcttttccctgcaaggctgtacggtcgacgaagcccggcctatcggcagggat
aaaaagcacctgcggctggtcctgcgcagcggcaagcatacgcggatatccggcgtggga
tggtccatggcggaggcctgcaacgaaatcatggaaggcgactgcatcgacgtggccttt
cagctggaacgcaacgagttcaacggcgtggcgtcgccgcagctcgtcgtgcaggacctg
cgcggccccgatattcctgtccatttagaccggacagtcatgatagatatatatttggcc
ttgaaaaaatgcattcccgaatgggggatgcccgtatggcaggtgcagcagcgcgccttg
gcggctgaaggcgaccggtatgaagcccatgccatttacgcggccatcctcgtgctgaag
gaaataggcgttttaaaaatacgaagcgacgtagacggcccgtcttattactttcccgtc
ctctccgggaaaatgtgcctgcatatgtcgccgacatatcagaaatacagtaagacctaa
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