KEGG   Methanimicrococcus hongohii: MmiHf6_01540
Entry
MmiHf6_01540      CDS       T09450                                 
Name
(GenBank) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
mehf  Methanimicrococcus hongohii
Pathway
mehf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mehf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MmiHf6_01540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mehf03021]
    MmiHf6_01540
Transcription machinery [BR:mehf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     MmiHf6_01540
 Prokaryotic type
  Archaeal type
    TFB
     MmiHf6_01540
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Lar_restr_allev OrfB_Zn_ribbon LysW-like_globular Elf1 Sigma70_r4 Desulfoferrod_N Trm112p HTH_AsnC-type FtrD-like HTH_Tnp_ISL3 Ribosomal_S27e Zn_Tnp_IS1595 A2L_zn_ribbon
Other DBs
NCBI-ProteinID: WNY22866
UniProt: A0AA96ZT79
LinkDB
Position
183224..184231
AA seq 335 aa
MVELERVRYSETVNRDKIKEMIRAKKEKETPKETEVYSCPECGSQNLVHDYERAELVCGD
CGLVVDADFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKSIS
SKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETASVVYRKAVD
KNLIRGRSIEGVAAAALYAACRQCGVPRTLDEVEEVSRVSRKEIGRTYRFISRELSLKLM
PTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGE
RRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggtagaattagaaagggttcgatattccgaaacagtcaacagagacaaaattaaagag
atgattcgcgccaagaaggaaaaggaaactccgaaagaaacggaagtttattcttgtccg
gaatgcggcagccaaaatctcgttcacgattatgagcgtgcagaacttgtctgcggcgac
tgcggtttggttgttgatgccgactttgttgacgaaggtccggaatggcgcgcatttgac
cacgaccagcgcatgaaacgctctcgtgtcggtgctccgatgacatacacgattcacgac
aaaggtctctcgacaatgattgactggagaaaccgtgactcatacggcaaatccatctct
tctaaaaacagagcgcaattgtaccgcttgagaaaatggcagagacgtattcgtgtcagc
aacgcaacggaaagaaacttggcattcgcgctttccgaattggaccgtatggcatccgcc
ctcggtcttccgagaacggttcgtgaaacggcatcagtcgtttacagaaaagcggttgac
aaaaacctcatccgcggacgcagtattgaaggtgtcgcagcagcagcgctttacgcagcc
tgccgccagtgcggtgttccgagaacgcttgatgaagttgaagaagtgtcaagagtgagc
agaaaagagattggcagaacttaccgtttcatttcaagagaattgtcgctcaaattgatg
ccgacttctccgatcgattacgttccgagattctgctccggcttgaatttaaaaggcgaa
gttcagtccaagagtgttgaaatcttgagacaggcttccgaaaaagaattgacaagcggc
cgcggcccgacaggagttgcagcagcagccatttacattgcgtctattctctgcggcgag
cgcagaacgcaaagagaagtggcagacgttgccggcgtgaccgaagtgacgattcgaaac
cgttacaaggaattggccgaagaattagatattgaaattatcctttaa

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