Methylophaga nitratireducenticrescens: Q7A_1461
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Entry
Q7A_1461 CDS
T02055
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q7A_1461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_1461
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q7A_1461
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q7A_1461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA
AAA_5
CorA
UB2H
IF2_N
HEM4
Kinesin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFI84290
UniProt:
I1XIS1
LinkDB
All DBs
Position
1473020..1475032
Genome browser
AA seq
670 aa
AA seq
DB search
MKKQFELVCEFEPAGDQPTAIASLVEGLNNGEMWQTLLGVTGSGKTFTIANVAQAVQRPV
MVLAPNKTLAAQLYSEMKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASVNEQIE
QMRLSATKAMLERRDAIIVSSVSCIYGLGDKDAYLAMVMHLVQGDIINQREILRRLAELQ
YSRNDIELSRGTYRVRGEVIDIFPAESERDAVRVELFDDEVEQISYFDPLTGEILQRMNR
ITIYPKTHYATPRETILGAVDSIKDELRERLAELNEQNKLVEAQRLEQRTRFDIEMLLEL
GYCNGIENYSRHLSTRQAGEAPPTLFDYLPDDAILVIDESHVMIPQIGAMYKGDRSRKET
LVNYGFRLPSALDNRPLMFDEWEKLAPQTIFVSATPGKYEAEHAGNIVEQVVRPTGLIDP
EVEIRPVGTQVDDLLSEITKRTAVNERVLVTTLTKRMSEDLTDYLREHNVKVRYLHSDID
TVERMEILRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNLNGKAILYADKITGSMQRAIDETDRRREKQIAHNLEHGITPIGIIKSIRGGMDDSK
SKKEEKLRFAEVAEEHAKYASLSPQQLAKRIQQIENAMYKHAQNLEFEEAAKLRDELDKV
RKMALGPVAL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatttgaattagtctgcgagtttgaaccggcgggggatcaaccaactgcg
attgcgtcgctggttgagggattaaacaacggtgaaatgtggcagaccctgttgggggtc
accggctcgggaaaaacctttacgattgccaatgttgcgcaagctgtgcagcgtccggtg
atggttctggcacccaataaaacgctggctgcacaactgtatagtgagatgaaagagttc
tttcccaataatgcggtggaatatttcgtgtcctactacgattattatcagccggaagcc
tatgtgccgtcatccgatacctttatagataaagatgcctcggtgaacgagcagattgag
caaatgcgtttatcggcaaccaaagccatgctggaacggcgcgatgcgattatcgtctcc
agtgtctcctgtatttatggcttgggtgataaagatgcctatctggcaatggtcatgcat
ctggttcagggcgatatcattaatcaacgcgaaattttacggcggctcgctgaattgcag
tattcgcgaaatgatattgaattgtctcgcggcacctaccgggtgcgtggcgaagtgatt
gatattttcccggcagaatccgaacgtgatgcggtgcgggttgaactgtttgatgatgaa
gttgaacaaatcagctatttcgatccgttgaccggggaaatattacaacggatgaaccgc
attaccatttatcctaaaactcactatgccacgccgcgcgagaccattcttggtgctgtg
gattcgatcaaagatgaattacgtgaaagattggctgaactaaatgaacagaataaatta
gtcgaagctcagcgcttagagcagcgcacccgttttgatatcgaaatgttattagagctt
ggttattgcaacggtattgaaaactattctcgacatttatcgactcgacaagcaggagag
gcaccgcccactttatttgattacctgcctgatgatgccattttggtcattgatgaaagc
cacgtgatgattccgcagattggcgcgatgtataaaggtgatcgttcacgtaaggaaacg
ctggtgaattatggtttccgtttgccttctgcattggataatcgtccgttgatgtttgat
gaatgggaaaagctggcaccacagaccatttttgtttcggctacaccagggaaatatgaa
gcggaacatgctggcaatattgtcgaacaggtagtgcgtccaaccgggttaatcgatcct
gaggtggaaattcgtccggttggcacccaggtcgatgatttgctttccgagattactaaa
cgcactgctgttaacgagcgtgttctggtcaccacattgaccaaacgcatgtcagaagat
ctcactgattatctgcgcgagcacaacgtcaaggtgcgatatctgcattcggatatcgat
acggtcgaacggatggagattctgcgtgatcttcggctgggggaatttgacgtgctggtg
ggtatcaacttactcagggaaggactggatttacctgaagtctcgctggtagcgattctg
gatgccgataaagaagggttcctgcgcagtgaccgttcactgattcagaccatcgggcgt
gcagcgcgaaacctcaatggtaaagcgattttatatgcagacaagattaccggttcaatg
caacgggcaattgatgaaaccgatcggcggcgtgaaaaacagattgctcataatctggag
catggcattaccccgattggaattatcaaatcgattcgtggtggcatggatgattcgaaa
agcaaaaaagaggaaaaactgcgctttgccgaagtggctgaagaacatgccaaatatgct
tctttatcacctcagcaattggctaaacgaattcaacagattgaaaatgcgatgtataaa
cacgcacagaacctggagtttgaagaagcggctaaattaagagatgaacttgataaagta
agaaagatggcgctagggccggttgctttgtaa
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integrated database retrieval system
