Methanosarcina sp. Kolksee: MSKOL_3459
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Entry
MSKOL_3459 CDS
T03821
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
mek
Methanosarcina sp. Kolksee
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AKB49236
UniProt:
A0A0E3LKB6
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Position
complement(4468689..4471466)
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AA seq
925 aa
AA seq
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MKHPLIKSDTVEQRLYQLNLAGKALEGSSLVVLPTGLGKTVIALFVIVSRLQRFGGKALI
LSPTKPLVEQHAAFFKKVMALPEDEVLTFTGSIAPAEREKLWAQGKLIVSTPQVIENDLL
TKRISLEDVTHITFDEAHRAVGNYAYTFIAEKYFESARNPHVLGITASPGSSDEKISEVC
QALHIENVSVKTEKDKDVRPYVQEKEIEWLQVQLPPEMAEIRSYLEKIFDDRLVTIRGLG
FSPGSGKYVSKKDLLLFQKKLQGEIRVGGDPAVFTAMSVLAEMVKVNHAVEMIETQGLEP
FRKYLEKLDAEASSSSASKASKRLMDDLYMRKALYRAKECEVEHPKLELARKLVSEQLKE
SPDSRVIVFTNYRDTAEIVVNALSEVPGIAPIRFVGQASRLKDKGLTQKQQVEVLDKFRA
GEYNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRQHKGRVIILVTKGTR
DEAYYWSSKSKEKKMLNSMHGLEALLVPKNSKQGSKLSDFESEAFIPDYAQNEAESETKT
GNRLKNADVMQGNKGPMQESSDLAVNLSGFVNSRGKAVDGNVFPDNKDAAVDSSSFAGIG
GRSSDIRDLTVDSGELTVDSRDMAAGSDCNRANEEINEDNRGVGKEENSGEENSREENSR
EGKSRDEKSREENVKERQKTFVYFETLSGKKPESAPETTAEASKIEINPESLKMVVDFRE
AKSGVANVLDKLGVEVIFTTLEIGDYVVSDRLAVERKRTDDFVNSLVDGKRNLFVQLSNL
TRVYQKPVLIIEGTELFTSRQINPNAIYGSLISIAIDFGVSLLYSRDEEETAAILKMLAK
REQMENKREVNPHGKKSASTLIEQQEYLVSAIADIGPKAARNLLLHFGSVEAIMKADAKE
LKNVKLIGPKRATKIRELIEAPYKG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacccgctgataaaatccgataccgttgagcagaggctttatcagttaaatctt
gcaggaaaagcccttgaaggatcaagtcttgttgttcttcctacagggcttggaaaaacc
gttatagctctttttgtaattgtttccagacttcagcggttcgggggaaaagccctgatt
ctttctccaacaaaaccgcttgttgagcaacatgcagcttttttcaaaaaagtaatggcg
cttcccgaagacgaagttctcacttttactggcagtattgcacctgcagagcgtgaaaaa
ctctgggctcaggggaaattgatagtatccacccctcaggtgattgaaaacgatctccta
acaaaaagaatcagccttgaagatgtaacccacatcacctttgatgaagcccatagggca
gtaggaaattatgcttacacttttattgcggaaaaatacttcgagagcgcaagaaaccct
catgtgctcggaattactgcaagtcctggcagttcggacgagaaaatctctgaagtatgt
caggctttacacattgagaatgtctcggtgaagactgagaaagataaagatgtccgccct
tatgttcaggaaaaagaaatagaatggcttcaggtccagcttccccccgaaatggccgaa
atccggagttatctggaaaaaatctttgatgataggctcgtaacaataagaggcctgggg
ttttcaccaggtagtgggaagtacgtctccaaaaaagatcttttgcttttccagaagaaa
ttacagggtgaaattcgggtaggaggagatcctgctgtttttactgcgatgtcggtgctt
gctgaaatggtgaaggtgaaccatgctgtggaaatgattgagactcagggacttgagcct
ttcaggaaatacctggagaaacttgatgctgaagcctcttcaagcagtgcaagcaaggct
tcaaaaagactgatggacgatctctatatgagaaaagctctttatagagcaaaggaatgc
gaggtcgaacatcctaaactagagcttgcccggaaactcgtatccgaacagctaaaagaa
agccctgattccagggtaattgtttttacgaattacagggacacagcagagatagtagta
aatgccctatcagaagttccaggaattgcccctatccgttttgtagggcaggcctcgcgc
cttaaagacaaagggcttacgcaaaaacaacaggtggaagttctcgataagtttagagca
ggagaatacaacgtacttgtagctacctcagttgctgaagaaggtcttgatatcccttcc
acagacctggtattattctacgagcccattccctcggaaattcggagcatccagcgtaaa
ggcaggacaggcaggcagcataaaggtagggtcattatacttgtgacaaagggtacacgc
gacgaagcctattactggagcagtaagagcaaggaaaaaaagatgctaaacagcatgcac
gggcttgaagctcttctggtccccaaaaactcaaagcaaggttcgaaactatcagacttt
gagtccgaagcttttattccggactatgcacaaaatgaagctgaaagtgagactaaaaca
ggaaataggttgaaaaatgcagatgtaatgcagggaaataaaggcccaatgcaggaaagc
agtgatctggctgtaaatctcagtggttttgtaaatagcaggggcaaagctgtagatggc
aacgtttttccagataacaaggatgcggctgtagatagcagtagttttgcaggcatcgga
ggcaggtcttcagatattagagatttaactgtagacagcggggagttaactgtagacagc
agagatatggctgcaggctcagactgcaacagggcgaatgaagaaattaacgaagataac
cgtggggtcgggaaagaagaaaatagcggagaagaaaatagcagagaagaaaatagtaga
gaaggaaagagcagagacgaaaaaagcagagaagaaaacgtaaaagaaagacaaaaaacc
tttgtctattttgaaactctttctggaaagaaacctgaatccgcacccgaaactactgca
gaagcatccaaaatagaaatcaatcccgaatccctgaaaatggtagtggacttcagggaa
gcaaaaagtggggttgcaaatgttcttgataagcttggagtagaagttatttttaccacg
cttgaaattggtgattacgttgtaagtgaccgccttgccgtggagagaaagcgcacggat
gactttgtaaactctcttgttgatggaaaacgtaatctttttgtgcagttatcaaacctt
acaagagtatatcaaaagcctgttcttattattgaaggaacagaacttttcacttcaagg
caaataaaccctaatgctatttacggctccttgatatccattgctattgattttggagtg
tcgctgctatattcaagagatgaagaagaaactgctgcaattttaaaaatgcttgcaaag
cgtgagcagatggaaaataaaagagaggtcaaccctcacgggaaaaagtcagcaagtacc
cttattgagcagcaggaatacctggtatccgcgatcgcagacatcgggccaaaagctgca
agaaaccttcttttgcacttcggctcagtagaggctattatgaaagctgatgctaaagaa
ctaaagaatgtaaaattaatagggccaaaaagagcaacaaaaattagagaactcattgag
gctccctataaaggataa
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