Methanobacterium lacus: Metbo_2120
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Entry
Metbo_2120 CDS
T01437
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mel
Methanobacterium lacus
Pathway
mel03410
Base excision repair
mel03430
Mismatch repair
mel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Metbo_2120
03430 Mismatch repair
Metbo_2120
03440 Homologous recombination
Metbo_2120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mel03400
]
Metbo_2120
DNA repair and recombination proteins [BR:
mel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Metbo_2120
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Metbo_2120
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Metbo_2120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH_CID
DHH
Secretogranin_V
Motif
Other DBs
NCBI-ProteinID:
ADZ10339
UniProt:
F0TBZ7
LinkDB
All DBs
Position
2165704..2167101
Genome browser
AA seq
465 aa
AA seq
DB search
MLKSNPMNLSFEKAHDLIKKSEDIKIYTHIDCDGVTAGAVLSSMLDKLGKDHEVEFISLD
QMDDLVTENELTIFSDLGSGQEMDKLCTSNSKTLILDHHPPIRKLDNYLNGQLIELNPHH
HNIDGSYEVSGGGMTYLLARTFGYTDLSWMGVLSAVGDMQNSFSGKLIGLNSSILQESIQ
QNLISSQNDLAIYGRQTRPLYIALSYFGDVNLPITNNKTECQMLLNKLDIPMKNGRKYRS
LCDLSVEEKGRLFSELVRMLSLEVPSRYVKYVPKLISGDSYEFLMEEKYSPLRDASEFST
AVNACGRHKHHKVAMNVLKGDRGASLDEMEHLALEHRRYLAQKMEWIRGDERITPMNNLQ
YFEGSEIKSEVIGTIAGMILSYGDWKKPIVGFTPIGEEKEGIKVSLRCSRLLAYDGIHFG
NLIRKVAKKVGGNGGGHSVACGAYIPEGSTAKFLKIFDESLKGVV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatccaatgaatttatcttttgaaaaggcccatgatttgataaagaaa
tctgaagatattaaaatatacacacacatcgattgtgatggtgttacagcaggtgccgtg
ctgtcttcaatgcttgataagcttggaaaggatcacgaagtagaattcatcagtctggat
cagatggatgatcttgtgacagaaaatgaattaaccatcttttctgacctgggatctgga
caggaaatggacaaactctgcacatccaattcaaagacattaattttggatcaccatccc
cccataagaaagctggataactatctaaatggccagttaatagaactgaacccacaccat
cataacatagatggatcctacgaagtttcaggcggaggtatgacctaccttttggctaga
acctttggctacactgatctaagttggatgggagttttaagtgctgttggagacatgcaa
aacagtttttcaggtaagctcatcggattaaacagcagcatacttcaagaaagcattcaa
caaaatctgatctcgtctcaaaacgaccttgcaatctatggaagacaaacaagaccccta
tacattgcattgtcctactttggagatgttaatctgccaatcaccaacaacaaaactgag
tgccagatgttgttaaacaaactcgacatacccatgaaaaatggtcgtaagtacaggtca
ctgtgtgatctaagtgttgaagagaagggaaggttgttctctgaactggtgagaatgttg
agtttggaggtaccttcaaggtacgttaaatatgtgcctaaattaatttctggagattcc
tatgaatttttaatggaagagaagtactctcccctcagagatgccagtgaattttcaact
gctgtcaatgcctgcggcaggcacaaacaccacaaagttgcaatgaatgtacttaaaggt
gacaggggtgctagcctagatgaaatggaacatttagcccttgaacacaggcgttacctt
gcccaaaaaatggaatggataaggggtgatgaacgaatcactccaatgaacaacctccag
tactttgagggtagtgaaataaagagtgaagtaataggaaccatagcaggaatgatactg
agttatggtgattggaaaaaaccaatagttggtttcacacctattggagaggaaaaagaa
ggtattaaagtatctcttagatgttccaggcttttagcatatgatggaattcacttcgga
aatttaatacgtaaggttgcaaagaaggtgggtggaaacggaggaggtcactctgttgca
tgcggtgcatacatacccgaggggagtactgctaaatttttaaaaattttcgatgaaagt
ttgaagggtgttgtttag
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