Methylomonas sp. LL1: IVG45_15245
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Entry
IVG45_15245 CDS
T07814
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IVG45_15245 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mell03019
]
IVG45_15245 (pcnB)
Enzymes [BR:
mell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IVG45_15245 (pcnB)
Messenger RNA biogenesis [BR:
mell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IVG45_15245 (pcnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QPK65623
UniProt:
A0A7T0NZQ3
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All DBs
Position
3278937..3280316
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AA seq
459 aa
AA seq
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MAIFKFFKKIFSVSDLPVNEAGAEPKIQVKIYPRPEHCISRSQISENALKVLQRLKKADF
EAYLVGGCVRDLLLGREPKDFDVATNASPEQVKQVFRNCRIIGRRFRLAHVFFGREIIEV
ATFRGSEPEESDQQVIHEDGRLLRDNVFGTLEQDVWRRDFTVNALYYNIRDFSVVDFTGG
IRDHADAILRLIGDPDVRYREDPVRMLRAVRFAVKLGFTLHPDTERPIYTQAELLKSIPA
ARLYDEVLKLFLAGYGVQTFEMLRHYGLFAMLFPATDRCLETQDHDFPRLFLIRALENSD
RRFSEGKSLTPYFLLAALLWEPLQINANNRIQQGENETLAYQNAANEVLSRQIKITAMPR
HITQSMRDVWFLQTKFSRTVGTRPYRLLEQAKFRAAYDFLQLRAETGGADPELLTWWTRF
QEADEDLQRKMTAPPKGGASKPRGKPRRYRNRAKPGPQE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atagccatttttaaattcttcaaaaaaatattttcggttagcgatttgccggttaacgaa
gcgggggcagagcctaaaatccaggttaagatctacccgcgtcccgaacattgtatttcc
cgttctcaaatcagcgaaaacgcattaaaggtgttacaacgcttgaaaaaagccgatttt
gaggcctatctggtcggtggttgtgtccgggacttgctactgggcagggagcccaaggac
ttcgatgtcgccaccaatgccagtccggaacaggtaaagcaggttttccgcaactgccgc
atcatcggccgccgctttcggctagcgcatgtgttttttggccgcgagattatcgaagtc
gccacttttcgcggttccgaacccgaagaatcggatcaacaagtcatacacgaagatggc
cgattgctgcgcgacaatgtgttcggcaccttggaacaggatgtctggcgccgcgacttt
accgtgaacgccttgtactacaacattcgggatttttcggtggtcgattttaccggcggc
atacgggatcatgccgatgcgatattacgcttgatcggcgatcccgatgtgcgttaccga
gaggatccggtgcggatgctgcgggccgtccgcttcgcggtaaagctaggatttaccttg
catccggacaccgaacgaccgatttatacccaagccgaattattaaaaagtatcccggcc
gcgcgcctctacgacgaagttctgaaactatttctggccggctacggcgtgcaaaccttc
gaaatgctcaggcattacggcttgttcgcgatgctgtttccagctaccgaccgatgcctg
gaaacgcaggaccatgactttccgcgcttgttcctgattcgggccttggaaaactccgat
cggcgtttttccgagggcaaaagcctgaccccttacttcttattggctgccttgttgtgg
gaacccttgcaaatcaacgccaacaatcgcattcagcagggcgaaaacgaaacccttgcc
tatcagaatgccgccaatgaagtattgagccgacaaattaaaattaccgccatgccgcgc
cacattacccagtcaatgcgcgatgtctggtttttgcagactaaattttccagaaccgtc
ggcacccggccctatcgactgcttgagcaggcgaaatttcgggcggcatacgattttctg
cagttgcgagcggaaaccggcggagccgatccggagttactgacttggtggacccgcttt
caggaagccgacgaagatttgcaacgaaaaatgacggcgccgccgaaaggcggcgcctcc
aaaccgcgcggcaaaccgcggcgctaccgtaaccgcgcaaaacccggcccacaagaatga
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