Methanococcoides orientis: J7W08_08945
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Entry
J7W08_08945 CDS
T08012
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
melo
Methanococcoides orientis
Pathway
melo03410
Base excision repair
melo03430
Mismatch repair
melo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J7W08_08945
03430 Mismatch repair
J7W08_08945
03440 Homologous recombination
J7W08_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melo03400
]
J7W08_08945
DNA repair and recombination proteins [BR:
melo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J7W08_08945
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J7W08_08945
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J7W08_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
SelA
Motif
Other DBs
NCBI-ProteinID:
UGV40217
LinkDB
All DBs
Position
1839331..1840719
Genome browser
AA seq
462 aa
AA seq
DB search
MIEKIQQIRSKALKCSSEIQRYDSVYVVSHIDADGLTSAGIIGKALERAGIDHSIHFVKQ
LDEVEIEAIANQNPELAIFTDLGSGMIESLNSHGINSIISDHHQPRGELEHHLNPHLFGF
NGSYELSGSGMTYMLANALGDNRDLADLAIVGAIGDLQHLKRGHLTGINRYILEEGAKEG
SLSYEKDIMLFGKQTRPVFKLLQFASDPYLPGLTGNEDACIGFLHDLGIRFSGDERWRRW
IDLEQNDKQKVVSALVQYCLRSGLPPYKIERLIGEVYLLMKEKEGTEMRDASEYSTLLNA
TARYGHADIGLAVCMGDRGKAYESARQLLSEHRQNLVNGLMFVKENGITELNNIQYFDAG
SNIMETIVGIIAGMSTSIAGNRSLPIIAFADSKDGVKVSARGTQDLIRKGLNLSEAMAVT
TAEIGGAGGGHDIAAGATIPFNVKEEFLQKLDSVIGEQLRKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaaatccaacagataaggtcaaaagctttgaagtgttcatctgaaatacag
aggtacgattctgtatatgtagtctcacacatagatgctgacggccttacatccgccggg
atcattggcaaagctctcgaaagggcaggcattgatcattccatccattttgtcaagcaa
ctggacgaagttgaaattgaggccatagccaaccagaatccggaacttgcgatcttcact
gaccttggcagcggtatgatagagtcgctcaactcacacggcatcaattcaataatatca
gaccatcaccagccacggggagaactggaacatcacctaaacccccaccttttcgggttc
aacggatcatacgagctcagcggctccggaatgacctacatgcttgcaaatgcccttggg
gacaacagggatcttgccgaccttgccatagttggagccataggggacctacagcatttg
aaacgaggacatcttacaggaattaaccgctacatcctcgaagagggggcaaaggaaggc
agcctgagttacgagaaggacataatgctcttcggaaaacagacacgccctgtcttcaaa
ctactccagttcgcatccgacccataccttcccggacttaccggaaatgaagatgcatgc
attggatttttgcatgaccttggaatacgcttcagcggggatgaacgttggagaagatgg
atcgaccttgagcaaaatgacaagcagaaagttgtatccgccctcgtgcaatactgcctt
cgttcaggcttaccaccatacaagatcgagagactcattggagaggtatacctgctcatg
aaagaaaaggaaggcacagaaatgagagatgcatcagaatattccactttgctcaacgcc
acagcacgctacggacatgcggacattggcctggcggtctgcatgggcgatcgcggcaaa
gcttatgaatccgcccgccagctgctgagcgagcaccggcagaaccttgtgaacggactt
atgttcgtcaaggagaacggcatcacagaactcaacaacatccagtatttcgatgcagga
tccaatataatggagaccatcgttgggatcattgcaggcatgagcacatccatcgcagga
aaccgctcccttccgataatagcctttgcagattcgaaggacggtgtaaaggtctcagcc
cgcggaacgcaggatctgatcaggaaagggctcaacctgtctgaagccatggcggtgaca
acagcagagataggaggcgcaggaggaggtcacgatatcgcagcaggtgccaccatacca
ttcaatgtaaaagaagaattcctgcaaaagctcgattccgtcattggtgagcaattgcgc
aaaaagtga
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