Metallosphaera sedula MJ1HA: MJ1HA_1129
Help
Entry
MJ1HA_1129 CDS
T08286
Name
(GenBank) ATP-dependent RNA helicase SrmB
Organism
memj
Metallosphaera sedula MJ1HA
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ssDBP_DBD
Motif
Other DBs
NCBI-ProteinID:
BBL47028
LinkDB
All DBs
Position
964372..967683
Genome browser
AA seq
1103 aa
AA seq
DB search
MDRLALEVAYQEILKTELCIIRHGHYCVDFDNETYVSIHPVTIHDFSERLSPIDLLYSLV
KAHQRFGGSSLDSYVKQVLETLGRSGDLEDLVKALVEEGLLYEDDCEELTHVMRVQTVNK
IRNLSREFNGLVRYNYAWDEIRRLPGGEKLLKFEDRLKGKCFMTYHGYLMRVMRDLGPYP
GEGRVMEAYVLPFIEEGITEYNIPLRELAPIMTKFVGELSGVDSTRIVDAVLRASQAFIR
GGMLSRYQAEMLRSFLSRHDPMIGVISAPTSAGKTTIFFLYTVLKLLAFKAKKDKRKAML
IYPRKTLAREQLQRLVNFLMELNPLLEAMGISPMTLAIYDGDSPSTRRSLERQTTPTFRG
LKCPDGSPMVYRDGKPACGDRTLDWLTEVKDQGYQNDIILTNHSQIATNLFRSHDERVNL
FDNLSVIVVDEAHTFADPENSTHFFYTILEILLYLTEREKGLPLERPFDDVKETIGKINL
DLIFSSATLWGTELDKNLDLRGVGGFKGIGRAGSGQGIPKPVDDFLDTVLHSLRNLYDRK
EFLDFYTVVGPGEKRQRKLIVPMLIFPAPDYSATLLFTLASLYTIFFSDSTFRRMQRAFP
KGVNSIMFVDSKNVQRGIAEDFLGKILEDNRYHEDISLVSPIRYGTEKTTMGSRLIAEEL
NRAGSILDRTFTTYSVLNLYYTKDQLREISSPRDWIDAVKSGRLPRLRDGKTLLDVLQDM
DRGLSSKEELQLMGERSLFYMVYHNADLKKEERIKREEVLSSNRWRTVLSTSTLELGIDL
PNVGIILQYGAPSTSDSIIQRFGRGGRNDDVLRVSLGILVARSHGHDVSLFDEYYAIRRL
FFPVTLKPKPSKTRDEVVKAYSYVALLGFLSRNLGKDIEETVNYISSSDDFRQRAREFLN
SMLPLLVKDHSRLVEDVIEDLKQIARIYTYSRNTAIDVEQGNLVTADLDRIRELITRIIN
EIEGRCKGKVDDLCRTSLIPLQRTLEVAETDERLNLTTLVTSSSRILNAFYMVNSRKGDK
ELENLKIDLKALAGFFYPHSYFSRKVKRNFLHFLTYWVKPEVPHPSIRSMESISFTITGE
GLEENSVSRPDLLLKDVPMRRSR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggataggttagccctagaggttgcctaccaggagatcctgaagaccgaactctgcatc
ataaggcacgggcactattgcgtggatttcgacaacgagacatacgtctcgatccatccg
gtcactattcacgacttcagcgagaggcttagcccgattgacctactctactccctggtc
aaggcacaccagaggttcggtgggtcaagcctggactcctacgtgaagcaggttctcgag
accctggggaggagcggtgacctcgaggatctcgtgaaggctctggtggaggagggactc
ctctacgaggacgactgcgaggagctaacccacgtgatgagggttcagactgttaacaag
attagaaacctgagcagggaattcaacggtttggtgaggtacaactacgcctgggacgag
atacgcaggttacctgggggcgagaaactcctcaagttcgaggataggctcaagggaaaa
tgcttcatgacctaccacgggtacctcatgagggtgatgagggacctgggaccttacccc
ggggagggaagggtgatggaggcctacgtcctcccgttcattgaggagggaatcaccgag
tacaacattccactcagggaactcgcccccatcatgaccaagttcgtgggtgagctgtcc
ggcgttgactcaaccaggattgtggacgccgttctaagggcctcgcaggccttcatcagg
ggaggtatgctttcgaggtatcaggctgagatgttgaggagcttcctgtccaggcacgac
cccatgataggcgtcatctcggccccaacgtctgccggtaagaccacgatcttcttcctg
tacacggtgctgaagctactggccttcaaggcaaagaaggacaagaggaaggcgatgctg
atttaccccaggaaaaccctcgccagggagcaactgcagaggctggttaacttcctcatg
gagctgaaccctctcctcgaggccatgggcatctctcccatgaccctggccatctacgac
ggcgactctccctcgacgagaaggagcctcgagagacagaccaccccaaccttcaggggg
ctcaagtgccccgacgggagtcccatggtgtaccgggacgggaagcccgcgtgtggggac
aggacgcttgactggctcaccgaggtgaaggaccagggataccagaacgacataatcctg
accaatcacagtcagatcgcaaccaacctctttcggtcccacgacgagagggtcaacctg
ttcgataacctctcggtcatcgtcgtggacgaggcccacaccttcgccgacccggagaac
agcacccacttcttttacacgatcctcgagatccttctctacctcacggagagggagaag
ggtttacccctcgagaggcccttcgacgacgtgaaggagaccatagggaagatcaacctt
gacctgatcttctcctcggcgaccctctggggcacggagctggacaagaacctcgatctc
aggggagtgggaggcttcaaggggatagggagggccgggtccggccaaggcattccgaaa
cccgtggatgacttcctggacacggtcctccacagccttaggaacctctacgacaggaag
gagttcctcgacttctacaccgtggtgggacccggagagaagaggcagaggaagctcata
gtccccatgctaatcttccccgcacccgattactcggcgacccttctgttcacgctggcc
tctctctacacgatcttcttctccgacagcaccttcaggaggatgcagagggccttcccc
aagggagtgaactccataatgttcgtggatagcaagaacgtgcagagggggatagcggag
gacttccttgggaagatactcgaggataacaggtaccacgaggatatctccctcgttagc
cccatcaggtacggcaccgagaagacgaccatgggatccaggctaatcgccgaggagctc
aacagggcgggctccatcctggacaggaccttcacgacgtacagcgtgctgaacctgtac
tacaccaaggatcaactcagggagatctccagccccagggactggatagacgccgtgaag
tcggggagactcccgcgactcagggacgggaaaaccctccttgacgtgctccaggacatg
gacaggggactcagcagtaaggaggaactccagctcatgggggagagatccctcttttac
atggtgtaccacaacgcggaccttaagaaggaggagaggataaagagggaggaggtcctc
tcctcaaacaggtggaggacggttctctcaacctccacgctggagctcgggatagacctc
ccaaacgttgggataatacttcagtacggtgccccctcgacctcggacagcatcatccag
aggttcgggagagggggtaggaacgacgacgtgttgagggtatccctcggaatcctggtt
gccaggtcgcacggacacgacgtgagcctcttcgacgagtattacgcgatcaggagactc
ttcttccccgtaaccctcaagccgaagccctccaagacaagggacgaggtcgtgaaggcc
tactcctacgttgccctcctgggcttcctctcaaggaacctggggaaggacatcgaggag
accgtgaactacatctctagtagtgacgatttcaggcagagggcaagggagttcctcaac
tccatgttacccctcctggttaaggaccactcaaggctggtggaggacgtcattgaggac
ctgaaacagatagccaggatttacacctactccaggaacacggcgattgatgtggagcag
ggcaacctggttacggccgacctcgacaggataagggagctgataacccgcatcatcaac
gagatcgaggggaggtgcaagggcaaggtcgacgatctctgcaggaccagcctgatccct
ctccagagaacccttgaggtcgcggagaccgacgagaggttgaacttgacaacgctggtc
acctccagctccaggatcctcaacgccttctacatggtgaactccaggaagggggataag
gagcttgagaacctcaagattgacctgaaggccttggcaggtttcttctaccctcactcg
tatttctcgaggaaggtgaagaggaacttcctccacttcctcacgtactgggtcaaaccg
gaggtaccgcacccctctatcaggtccatggagtccatcagcttcaccatcacgggagag
gggctggaggagaacagcgtcagcaggcccgatctcctgctgaaggacgttcccatgagg
cgatcaagatga
DBGET
integrated database retrieval system
