Candidatus Megaira endosymbiont of Mesostigma viride: LF888_02620
Help
Entry
LF888_02620 CDS
T07589
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
menm
Candidatus Megaira endosymbiont of Mesostigma viride
Pathway
menm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF888_02620 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
menm03400
]
LF888_02620 (uvrB)
DNA repair and recombination proteins [BR:
menm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF888_02620 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LF888_02620 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
UB2H
AAA_30
AAA_22
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UCM94587
LinkDB
All DBs
Position
complement(615357..617354)
Genome browser
AA seq
665 aa
AA seq
DB search
MSLFKLHSEYKPGGDQPKAIKELLAGLEAEEKSQMLLGITGSGKTFTMANVIAASNRPSL
IMAHNKTLAAQIYSELKSMFPENAVEYFVSYYDYYQPEAYIPRTDTYIEKDSSINEQIDL
LRHSATRSLLERRDVIVVSSVSCIYGLGSPELYSQMTQELEAGKKYKRSELLLKLVDLQY
ERNDIAFERGTFRIRGESIDIFPSHYATRAWRLSFFGDELEYINEFDPLTGEKFRKLEKA
IIYANSHFVTPAAVIKTAIANIEIELEERLAYLKSLDKHLEYQRLKQRTDYDIEMLQSTG
TCKGIENYSRFLTGRAAGMPPPTLFEYLPKDGLLFVDESHVTIPQIRAMYNGDRARKSSL
VEYGFRLPSALDNRPLKFEEWMELRPQTIFVSATPSAFELEETQGVIVELIIRPTGLIDP
ECIVKPAVNQVEDLIDEIKNTVARGFRILVTTLTKKMAEDLTSYLQELGYKVSYLHSAIQ
TLERVEIIRDLRNGDIDIIVGVNLLREGLDIPECGLVAILDADKEGFLRSETALIQTIGR
AARNSEGRVLLYADKITNSMQKALEETSRRRTIQQEYNKKHNIIPRTIKTKIQALLELER
ASSVVKTDKASNELQNIINDPKKLKSCIDALRKQMRTCASNLEFEEATKLRDQIFTLEEA
LIELI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttcaaattacattcagaatataaaccgggcggtgaccaaccaaaggcgata
aaagagctgcttgcaggtcttgaagccgaggagaaatcgcaaatgctacttggtattact
ggttctggcaaaacctttaccatggcaaatgtaattgctgcctcaaatagaccgtcgtta
attatggcacataacaaaacgttagcggctcagatttattcggaacttaaaagtatgttt
ccagaaaatgccgttgaatattttgtttcatattatgattattatcaaccggaagcatat
attcctagaaccgatacctatattgaaaaagattcgtcaattaacgagcagatcgatctg
ctccggcattctgcaaccaggtccttgcttgaacgcagagacgtaatagtcgtttcgtct
gtttcttgtatctatggtcttggttcaccggaactttattcccagatgacgcaagaactc
gaagctggtaaaaaatataagcgcagtgagctgctgctaaaacttgtggatctgcaatat
gaaagaaatgatattgcttttgagagaggtacatttcgaattcgaggggaatcaatcgat
atatttccttcccattatgctaccagagcttggaggttatcttttttcggggatgagctt
gaatatatcaatgaattcgatccgctaacaggtgaaaaatttagaaagttagagaaagct
attatttatgctaactctcactttgttacgccagctgcggtaattaagactgctattgcc
aatatagaaattgaattagaggagaggttagcttatttgaaatctttagataaacatctt
gagtatcaaaggttaaaacagagaacggattatgatattgaaatgctgcaaagcaccgga
acgtgtaaaggaatcgaaaattattcgagatttttaaccggtagggcagcaggcatgccg
cccccgaccctatttgaatatttaccaaaagatggtttgttgtttgttgacgaaagccat
gtaacgattcctcaaattagagcgatgtataatggtgatcgggctcgcaaaagctccctc
gttgaatatggatttaggttaccttctgcgcttgataacagaccgctaaaatttgaagaa
tggatggaactaagacctcaaactattttcgtctcggctactccatcggcttttgaactg
gaagaaacccagggagtaattgttgagttaattataaggccgacaggcctgattgatccg
gagtgtatagtaaaaccggcagttaatcaggtagaagatttaatagatgaaataaaaaat
acagttgctcggggctttaggattctggtaacaacacttaccaagaaaatggcagaagat
ttgacctcttacctccaggaactaggttataaagttagctatttgcattcagctattcag
accttagaaagggtagagataatcagggatttaagaaatggtgatattgatataattgtc
ggcgttaatctacttagggaaggtctagatattcctgaatgcggactcgttgccattctt
gatgcggataaggagggtttcttgcgctcagaaacagcgcttattcaaacaattggtagg
gcggctagaaatagcgaagggagggttttgctatacgctgataaaatcacaaattccatg
caaaaagctttagaggaaacatcacgaagaaggactatacagcaagagtataacaaaaaa
cataacatcattccaagaaccattaagaccaagattcaagccttacttgaactagaaaga
gcaagtagtgtggtaaaaactgataaagcttctaatgagctacagaatattataaatgac
cctaaaaaactaaaatcctgcattgatgctctccgtaaacaaatgcgaacctgtgcaagt
aatttggagtttgaggaagctactaaattaagggatcaaatatttacacttgaagaagcc
ttaattgaattaatataa
DBGET
integrated database retrieval system
