Massilia endophytica: LSQ66_15430
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Entry
LSQ66_15430 CDS
T09693
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
meny
Massilia endophytica
Pathway
meny01501
beta-Lactam resistance
meny01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSQ66_15430
01503 Cationic antimicrobial peptide (CAMP) resistance
LSQ66_15430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_15430
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_15430
Transporters [BR:
meny02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LSQ66_15430
Antimicrobial resistance genes [BR:
meny01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LSQ66_15430
BRITE hierarchy
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UGQ45184
LinkDB
All DBs
Position
3370230..3373379
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPVFAWVIALFILLGGALSITMLPVAQYPTIAPPSIVINANYPGATAQVLDDA
VTSVIEQEMNGADGLQYVESQSDASGGVTITVTFVPGTNPDLAAVDVQNRIKRVESRLPQ
AVTQQGVQVNKARSNILMFVGLYSTDGKMDPNAIGDYMARNVVNEIKRLPGVGQAQLFGT
ERALRVWLDPNKLTGYKLNMNDVTAAIRAQNAQVASGTIGDLPNPASQTFQAPVVVTGQL
TSLEQFGDIVLRANPNGSTVRLKDVARLELGGANYNISARLNGQPFVAIAVQQSLTGNAL
ATANLVKAKMEELSKYFPPGLKYTVPYDTSLFVKISIEEVVKTLLEAVLLVFLVMYLFLQ
NFRYTLIPTIVVPVALMGTFAAMQMFGYSINVLTMFGMVLAIGILVDDAIVVVENVERIM
SEEGLSPREATRKAMSQITGAIVGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVSAMVF
SALMALSLTPALCATMLKPVEAGHHHEKRGFFGWFNRGFARTARGYQGTVAKIVTRTGRF
MLIFVALLGIVAWLYVRLPSSFLPNEDQGYIVTNVQLPPGASRSRTEAVLAKVDEYFRKQ
PGVARTIAVAGFSFSGNGQNAGLVFVPLKDWKERGKDQSATAIAGAAFGALSGIPDAIVF
PLSPPPIRELGNATGITARLQDRSSLGHEALINARNQLLGMAGKSSIIKGLRPEGLEDAP
QLQIDIDREKANALGVTFADINSTLSVALGSSYVNDFNSSNRQQRVIVQADQTRRMQPED
ILRLNVKSATTGNMVPFASFVRSHWVNGPVQLVRYNGYPAIKLSGDAAPGHSTGEAMEEL
ERLAAQLPPGFGIEWTGQSLEERTSGAQAPALFALSMLAAFLVLAALYESESIPVAVLLV
VPLGVLGALLGAHLRELPNDVYFKVGLIAIIGLSAKNAILIIEFAKDLQAQGMGLIEATL
EAVHLRFRPIIMTSLAFILGVLPLVVASGAGSASQRAIGTGVMGGMITATVLAVFLVPVF
FVVVRRIFKGSERQRRLAAHELDLPETKQ
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattcttcattgaccgccccgtgttcgcatgggtgatcgcgctcttcatcctg
ctgggtggggcactgtcgatcaccatgctgccggtggcgcagtaccccaccatcgcaccg
ccgtccatcgtcatcaacgccaactatcccggcgccaccgcccaggtgctggacgacgcc
gtcaccagcgtgatcgaacaggagatgaacggcgcggacgggcttcagtacgtcgagtcg
caaagcgatgcaagcggcggcgtgaccatcaccgtgaccttcgtgcccggcaccaatccc
gacctggcggccgtggacgtgcagaaccgcatcaagcgcgtggaatcgcgcctgccgcag
gcggtgacgcagcagggcgtgcaggtgaacaaggcgcgttcgaacatcctcatgttcgtg
ggcctttactccaccgacggcaagatggacccgaacgccattggcgactacatggcccgc
aacgtcgtcaacgagatcaagcgcctgccgggcgtgggccaggcccagctcttcggcacc
gagcgcgcgctgcgcgtatggctcgatccgaacaagctcacgggctacaagctcaatatg
aacgacgtgacggcggcgatccgcgcgcagaacgcgcaggtggcatccggcaccatcggc
gacctgcccaatcccgcctcgcagaccttccaggcgcccgtggtggtgaccggccagctc
acgtcgctggaacagttcggcgatatcgtgctgcgcgcgaatcccaatggctccaccgtg
cgcctgaaggatgtggcgcgcctggagctgggcggcgccaactacaacatcagcgcgcgc
ctgaacggccagcccttcgtggccatcgccgtgcagcagtccctcaccggcaatgcgctg
gcgacggccaacctggtgaaggcaaagatggaggagctgtccaagtacttcccgcccggc
ctgaaatacaccgtgccatacgatacttcgctgttcgtaaagatctccatcgaggaagtg
gtgaagaccctgctcgaagcggtgctgctggtgttcctggtgatgtatctcttcctccag
aacttccgctacactctgattccgaccatcgtggtgccggtggccctcatgggcaccttc
gccgccatgcagatgttcggctactccatcaacgtgctcaccatgttcggcatggtgctg
gccatcggtatcctcgtagacgacgccattgtggtggtggagaacgtggaacgcatcatg
agcgaggaaggcctgtcgccgcgcgaggcgacgcgcaaggccatgtcgcagattacgggg
gccatcgtcggcattaccctggtgctgatcgcggtgttcattcccatggccttcttcggc
ggcgccgtgggcgccatctaccgccagttctcgctgtcgatggtgtcggccatggtgttc
tcggcgctcatggcgctgtcccttaccccggccctgtgcgccaccatgctcaaaccggtg
gaagcgggccaccatcacgagaagcgcggcttcttcggctggttcaaccgcggctttgca
cgcaccgcacgcggctaccagggcaccgtcgcgaagatcgtcacccgcaccgggcgcttc
atgctgatcttcgtggccctgctgggcattgtggcgtggctgtacgtgcgcctgccttcc
tccttcctgccgaacgaggaccagggttacatcgtgacgaacgtccagcttccgcccggc
gcctcgcgcagccgcaccgaggccgtgctggcgaaggtggacgagtatttccgcaagcag
ccaggcgtggcgcgcaccattgccgtcgcaggcttcagcttctcgggcaatggccagaac
gcgggcctcgtgttcgtgccgctgaaggactggaaggagcgcggcaaggaccagtcggcg
actgcgattgccggcgcggccttcggcgccctgtccggcatccctgatgccatcgtgttc
ccgctgagccctccgccgatccgggaactgggcaacgcaaccggcatcacggcgcgcctg
caggaccgcagctcgctgggccatgaagcgctgatcaacgcacgcaaccagctgctgggc
atggccggcaagagctccatcatcaagggcctgcgtcccgagggcctggaagacgcgccg
cagctgcagatcgatatcgaccgcgaaaaggccaatgccctgggcgtgacctttgccgac
atcaattccacgctgtccgtcgccctgggctcctcgtatgtgaatgacttcaacagcagc
aaccgccagcagcgcgtgattgtgcaggcagaccagacccgccgcatgcagccggaggac
atcctgcgcctgaacgtgaagagcgcgacgacgggcaatatggtgcccttcgcctccttc
gtccgctcgcactgggtcaatggccccgtgcagctggtgcgctataacggctaccccgcc
atcaagctcagcggcgacgcggcgcctggccacagcacgggcgaggcgatggaggagctt
gaacggctggcggcccagctgccgccgggcttcggcatcgaatggaccgggcagtcgctg
gaggaacgcacctcgggcgcgcaggcgcctgcgctgttcgccctgtccatgctcgcggcc
ttccttgtgctggcagccctgtacgagagcgagtcgatcccggtggccgtgctgctggtg
gtgccgctcggcgtgctgggcgccctgctcggcgcccacctgcgcgagctgccgaacgac
gtgtacttcaaggtgggcctgatcgccattatcggcctctccgcgaagaacgcgatcctg
atcatcgagttcgccaaggacctgcaggcccagggcatgggcctgatcgaggcgacgctg
gaagcggtgcacctgcgcttccgcccgatcatcatgacctccctggccttcattctcggc
gtgctgccgctcgtggtggcaagcggcgccggttcggcaagccagcgcgccatcggcacg
ggcgtaatgggtggcatgatcacagcgaccgtgctggccgtattccttgtccccgtattc
ttcgtggtggtgcgccgcatcttcaagggcagcgaacgccagcgccgcctggcagcgcat
gaactcgacctgccggagaccaagcaatga
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