Massilia endophytica: LSQ66_17570
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Entry
LSQ66_17570 CDS
T09693
Name
(GenBank) pectinesterase family protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
meny
Massilia endophytica
Pathway
meny00040
Pentose and glucuronate interconversions
meny01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LSQ66_17570
Enzymes [BR:
meny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
LSQ66_17570
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_28
Pectinesterase
Motif
Other DBs
NCBI-ProteinID:
UGQ45583
LinkDB
All DBs
Position
complement(3839675..3842302)
Genome browser
AA seq
875 aa
AA seq
DB search
MMLRPAAVALLLASAPLHAQDSRRVTEPVPPQACVTLAAQAAADDTQRIQSAIGRCPAGQ
AVRLSASEGNASFTAGALTLRSGVSLLIDSGVTLIAVNDPKGYDRGANTCGTIDQNGKGC
RPFITIAKAKGSGIYGEGVIEGQGGRVVKGLAESWWQLARRAQKEDARQNVPRLIEVTDS
QGITLHKVTLRNSPNFHVTLNKVDGFTAWGVRLDTPATARNTDGIDPISSRNVTIAHSFL
RTGDDNIAIKAGNNGPTENISVLNNHFYNGHGMSIGSETNGGVRRVLVENLSMDGATSGL
RIKSDVSRGGAVDGVVYRNVCLRNIKAPIDFATRYNDKAKGSLIPSYTNIVLDGVRSLTP
GRIIVGGYDAAHPVRAVLRNVSLPSSAMQIEHAAIDGSWMGDGAPACEGRFAPFPETAPP
SVRPQLSLADAKRYDYREVLKYVGRAGEERVDPWDPLADPLAKGAVFKPDYTVDASAPED
GLRRFRSVQAAVSRAVADMAGRMERIYILVKPGAYRELVYIPAASAPITLYGEGKDAAAT
RISAGLDAAVKGASYAEDFSAQFAKAHPSIQEMHALIKDRPNISTSGSMTVWVRNNGFQA
RNITFENSYNKATGNAREECGERSCGNQAVDAQMNKVHHQAVALLVEGADKAQFENVRLI
GFQDTLYLKSSEARVTSRSFFNKSYIEGDVDFIFGDTTAFFYQSEIKSLGDRSTSYVAAP
NTNWKTKYGLVFDTCRFTHDNSPNAREGKFYLARQWFHNSRCTPYGTVPVEGYSCTLGTE
SVYKAPKGTITPTVLETVGKVAILNSSIGSHIHRTHPWSDWNRNGTLPYRPAQFTSDDFW
NNLQKAGIDPVKDLGYSRKPEPADIYLAEFNNSAE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccgacccgccgccgtggcgctgctgctggcctccgcgccgctgcatgcccag
gacagccgccgcgtcaccgaaccggttccaccgcaggcctgcgtgacgcttgccgcgcaa
gcggcggctgacgacacccagcgcatccagtcggccatcggccggtgcccggcagggcag
gccgtgcgcctgagcgcctcggaaggaaacgcaagcttcacggcgggcgcgctcaccttg
cgcagcggcgtgagcctgctgatcgattccggcgtcaccctgatcgctgtgaacgatccg
aaaggctacgaccgtggcgccaacacctgcggcaccatcgaccagaacggcaagggctgc
agacccttcatcacgatagccaaggcaaagggcagcggcatctacggagaaggcgtgatc
gaagggcagggcggccgtgttgtgaaaggtctggccgaatcctggtggcagctggcgcgc
cgtgcacagaaggaggacgcacgccagaacgtgccgcgcctgatcgaggtgacggactcg
cagggcatcaccctgcataaagtcacgctgcgcaactccccaaacttccacgtcaccctc
aacaaggtagacggcttcaccgcctggggcgtgcgcctcgatacacccgctaccgcacgc
aatacggacggcatcgaccccatctcctcgcgcaacgtgaccatcgcgcacagcttcctg
cgcacgggcgacgacaatatcgccatcaaggcgggcaacaacggccccaccgagaacatc
tcggtgctgaacaaccatttctacaacggccatggcatgtccatcggcagcgagaccaac
ggcggcgtgcgccgggtgctggtcgagaacctgagcatggacggcgcgacatccggcctg
cgcatcaagagcgatgtgtcgcgtggcggcgccgtggatggcgtggtgtaccgcaatgtc
tgcctgcgcaacatcaaggcgcccatcgacttcgccacgcgctacaacgacaaggccaag
ggctccctgatcccctcgtacaccaatatagtgctggacggcgtgcgcagcctgacgccc
ggccggattatcgtgggcggctacgatgcggcgcatcctgtccgcgcagtgctgcgcaat
gtgtcgttgccgtccagcgccatgcagatcgagcatgcggccatcgacggcagctggatg
ggtgatggcgctcccgcctgcgaagggcggttcgcaccgttcccggaaacggctccgcca
agcgtgcgtccgcagctcagcctcgccgatgcgaaacgctacgactatcgcgaagtgctg
aagtatgtgggccgcgcgggcgaagaacgggtggacccatgggatccgctggccgatccc
ctcgccaagggcgcggtgttcaagccggactacacggtcgacgcctccgcgccggaggat
gggctgaggcgcttccgcagcgtgcaggcggcagtgagccgcgcggtggccgatatggct
ggacgcatggagcgcatctacatactggtgaagcccggcgcctaccgtgaactggtctac
attccggccgcgagcgcgccgatcacgctgtatggcgaaggcaaggacgctgctgctacg
cgcatcagcgccgggctggatgcggcagtgaagggcgccagctatgccgaggacttcagt
gcacagtttgcaaaggctcatccttcgattcaggagatgcatgccctgatcaaggaccgc
ccgaacatttccaccagcggctcgatgacggtctgggtacgcaacaacggcttccaggcg
cgcaatatcaccttcgagaactcgtacaacaaggctaccggcaatgcgcgcgaggaatgc
ggcgaacggtcctgtggcaaccaggctgtcgatgcgcagatgaacaaggtgcaccatcag
gcggtggccctgctggtggaaggcgcggacaaggcgcagttcgagaatgtccgcctgata
ggtttccaggacacgctctatctgaagtcgtccgaagctcgtgtgacgtcgcgcagcttc
ttcaacaagtcctatatcgaaggcgatgtggacttcatcttcggcgacaccaccgccttc
ttctaccagagcgagatcaaatccctgggcgaccgcagcacgtcctatgtggccgcgccc
aacaccaactggaaaacgaagtacgggctggtgttcgatacctgccgcttcacacacgac
aattccccgaacgcgcgcgaaggaaagttctatctggcgcgccagtggtttcacaacagc
cgctgcacgccttacggcacggttccggtagagggctacagctgcacgctgggcacggag
agcgtgtacaaggcgccgaaaggcaccattacgccgaccgtactggaaactgtcggcaag
gtggccatcctcaattcgagcatcggttcccacatccaccgcacccacccatggtccgac
tggaaccgcaacggcacgctcccttaccgtccggcgcagttcacttcggacgatttctgg
aacaacctgcagaaagccggtatcgacccggtgaaggatctcggctacagccggaagcct
gaaccggccgacatttatctggcagagttcaacaattcagcggaataa
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