KEGG   Massilia endophytica: LSQ66_17765
Entry
LSQ66_17765       CDS       T09693                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
meny  Massilia endophytica
Pathway
meny00521  Streptomycin biosynthesis
meny00523  Polyketide sugar unit biosynthesis
meny00541  O-Antigen nucleotide sugar biosynthesis
meny01100  Metabolic pathways
meny01110  Biosynthesis of secondary metabolites
meny01250  Biosynthesis of nucleotide sugars
Module
meny_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:meny00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LSQ66_17765 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LSQ66_17765 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LSQ66_17765 (rfbC)
Enzymes [BR:meny01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     LSQ66_17765 (rfbC)
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: UGQ45620
LinkDB
Position
complement(3879543..3880088)
AA seq 181 aa
MKVIPTAIDGLLVIEPTVFGDDRGFFFESYNERRFRELTGVRAEFVQDNHSRSARKVLRG
LHYQIQQAQGKLVRVTAGSVFDVAVDLRKSSSTFGQWYGLELSAENKRQLWIPPGFAHGF
LVTSEHAEFLYKTTDYYAPEHERAILWNDPALGIEWPLDGEPLLSGKDQKGLLLAAAEVF
E
NT seq 546 nt   +upstreamnt  +downstreamnt
atgaaagtgattccgaccgcgatcgacggtctgctggtgattgaacccacggtcttcggc
gatgaccggggcttcttcttcgaaagctataacgagcgccgtttccgtgaattgacggga
gttcgcgcggagttcgtgcaggataaccactcccgctcggcgcgcaaggtgctgcgcggc
ctgcactaccagatccagcaggcccagggcaagctggtgcgcgtcactgcgggcagcgtg
ttcgacgtggccgtcgacttgcgcaagagctcgtcgaccttcggccagtggtacggcctc
gaactgtccgccgagaacaagcgccagctctggatcccgcccggctttgcccatggcttc
ctcgttaccagcgaacacgccgaattcctgtacaagaccacggactactacgcccccgag
catgagcgcgccatcctgtggaacgaccccgcgctgggcatcgaatggccgctggacggc
gagcctctcctgtccggcaaggaccagaagggcctgctgctcgccgctgcggaagtgttc
gaatga

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