Massilia endophytica: LSQ66_17765
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Entry
LSQ66_17765 CDS
T09693
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
meny
Massilia endophytica
Pathway
meny00521
Streptomycin biosynthesis
meny00523
Polyketide sugar unit biosynthesis
meny00541
O-Antigen nucleotide sugar biosynthesis
meny01100
Metabolic pathways
meny01110
Biosynthesis of secondary metabolites
meny01250
Biosynthesis of nucleotide sugars
Module
meny_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LSQ66_17765 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSQ66_17765 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSQ66_17765 (rfbC)
Enzymes [BR:
meny01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LSQ66_17765 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UGQ45620
LinkDB
All DBs
Position
complement(3879543..3880088)
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AA seq
181 aa
AA seq
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MKVIPTAIDGLLVIEPTVFGDDRGFFFESYNERRFRELTGVRAEFVQDNHSRSARKVLRG
LHYQIQQAQGKLVRVTAGSVFDVAVDLRKSSSTFGQWYGLELSAENKRQLWIPPGFAHGF
LVTSEHAEFLYKTTDYYAPEHERAILWNDPALGIEWPLDGEPLLSGKDQKGLLLAAAEVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgattccgaccgcgatcgacggtctgctggtgattgaacccacggtcttcggc
gatgaccggggcttcttcttcgaaagctataacgagcgccgtttccgtgaattgacggga
gttcgcgcggagttcgtgcaggataaccactcccgctcggcgcgcaaggtgctgcgcggc
ctgcactaccagatccagcaggcccagggcaagctggtgcgcgtcactgcgggcagcgtg
ttcgacgtggccgtcgacttgcgcaagagctcgtcgaccttcggccagtggtacggcctc
gaactgtccgccgagaacaagcgccagctctggatcccgcccggctttgcccatggcttc
ctcgttaccagcgaacacgccgaattcctgtacaagaccacggactactacgcccccgag
catgagcgcgccatcctgtggaacgaccccgcgctgggcatcgaatggccgctggacggc
gagcctctcctgtccggcaaggaccagaagggcctgctgctcgccgctgcggaagtgttc
gaatga
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