Candidatus Moranella endobia PCVAL: MPC_460
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Entry
MPC_460 CDS
T02613
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
meo
Candidatus Moranella endobia PCVAL
Pathway
meo03030
DNA replication
meo03430
Mismatch repair
meo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPC_460 (holB)
03430 Mismatch repair
MPC_460 (holB)
03440 Homologous recombination
MPC_460 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meo03032
]
MPC_460 (holB)
03400 DNA repair and recombination proteins [BR:
meo03400
]
MPC_460 (holB)
Enzymes [BR:
meo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPC_460 (holB)
DNA replication proteins [BR:
meo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPC_460 (holB)
DNA repair and recombination proteins [BR:
meo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPC_460 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
FlgN
NTPase_P4
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGJ61461
LinkDB
All DBs
Position
complement(511603..512601)
Genome browser
AA seq
332 aa
AA seq
DB search
MKWYPWLSSPYRQLIASYKQKRGHHAVLLHSQPGNGEQSLCYALMRWLMCRNPYGNNSCR
VCYSCRLMIVGNHPNYYQLVLGKDQHNIGIDSIRNIIDNLYGSVYYPGGVQVLWLPNVEE
LTEPAANALLQILEEPPANTYFIMSCQTTSRLLLTLRSRCLYWPLSTPNESHSVRWLQQL
GHDELRARTALRLCGTAPLAAEALLQPARWQERLELCTVLQNVIASGDLLALLPALNRDK
KDYGPINWLLSLIADALKYHYGAQEFIVNTDQPQLLVMLAERWPAGLLHTQWNTWLHVFR
QLQEINSVNRELLLTNQLLNWKYGTAEIYAYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccctggctctctagcccctatcggcagcttattgctagctataagcag
aagcgtgggcatcatgctgtgttactgcatagccaacctggcaacggcgagcagtcgtta
tgttatgcgcttatgcgctggctcatgtgccgaaacccgtatggtaacaacagttgtcgc
gtttgctatagctgtaggctgatgatcgttggtaatcatccgaattattatcaactagta
ctaggaaaagaccagcataatataggtattgatagtatccgtaatattattgataacttg
tatggtagtgtctattatccgggcggagtgcaagtgctatggttgccaaatgttgaagaa
ctaactgaaccggcggctaacgcactcttgcaaattttggaagagccaccggcaaataca
tattttattatgagttgccaaactacgtcacgcctattattaacgctaagaagtagatgt
ctctattggccgctgtctacaccgaatgagtcgcatagtgtgcgatggttacaacagtta
ggtcatgatgaactgcgtgcccgcactgcgctgcgcctgtgcggcacagctcctttggcg
gcagaggcactgctgcaaccagcacgctggcaggagcggctagaactatgcacggtattg
caaaacgttattgctagcggcgatttattggcgctgttgccagcactaaatcgcgataaa
aaagattacggcccaataaattggctactcagccttattgctgatgcactgaaatatcat
tatggcgcgcaagaatttattgttaatactgatcagccacagctattagttatgctggcg
gagcgctggccggctggcttgttacacactcagtggaacacttggctgcatgtttttcgc
cagctacaggagataaatagcgtgaatcgtgaattattgctaaccaaccaattacttaat
tggaagtatggcactgcggaaatctatgcttacctatga
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