Metamycoplasma equirhinis: JPM7_5890
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Entry
JPM7_5890 CDS
T09202
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
meqr
Metamycoplasma equirhinis
Pathway
meqr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meqr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JPM7_5890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meqr03019
]
JPM7_5890
Messenger RNA biogenesis [BR:
meqr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JPM7_5890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
FliL
Motif
Other DBs
NCBI-ProteinID:
BDX52982
LinkDB
All DBs
Position
complement(712194..713849)
Genome browser
AA seq
551 aa
AA seq
DB search
MNKINFFALGGLDENGKNAYVLEIKNKIFIINSGTKVPINSHNGIDTLICNYEYLEKRQK
DIVGLFVTDVHNATFSAIPWLLMKIKNLKIYTSAFNKIVLLDRISKYNIENSHYEIKTIN
STIDFEFAKVTPFDLAGGLPGQLGFNFEYEKGNILFMVNFVDGDLGPYGKTDFENIKKII
NNGKPLETLIMDSGLSAYSGKSIEKLWISKKIEYKFKETTEDCRIIVGLYDEDMITAHEI
LILAKRYHRPVITYGRTYSQLINLVAKINPELQWPEFIDYRLANDVKNAVILVTGAIERL
YLRFIRIASNNDVYLKLKNNDAVIVVAPPVNGLEVNYALTLDEIARNTSNLIELGSDQYY
PCNPAKEDIRNIIKMLKPKYYIPIQGLYRYLVVATHVAREAGMNLNNCLVLQNGKIAEFE
NGELISQKHSIRTVGDVVIDGLGIGDISHEVINERESLARDGIITISSLVDYKKKTPINE
LQISSYGIITKENKETIYKIINDLFYKEFDDKKPNEIDLKEIKEKLRKSIKRKIAKAIDK
EPMTVITLYEI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatcaacttttttgcattgggtggattggatgaaaacggtaaaaatgcctat
gttctagaaataaaaaataagatttttataataaactcaggaacaaaagttcctattaat
tcacataatggaattgatactttaatttgcaactatgaatatcttgaaaagagacaaaaa
gatattgttggtctttttgttactgatgtgcataacgcaaccttttcggcaattccttga
ttattaatgaaaatcaaaaaccttaaaatttacactagcgcatttaataaaattgtttta
ctagatagaatttcaaaatataatattgaaaatagtcattacgaaattaaaaccattaat
tcaacaattgattttgaatttgctaaggttacaccttttgatttggccgggggtttaccc
gggcaattaggttttaattttgaatacgaaaaaggcaatattttgtttatggttaacttt
gttgatggggatttgggcccatatggtaaaacagattttgaaaatatcaaaaaaataatc
aataatggaaaacctttagagacattaataatggattcaggacttagcgcatatagcggc
aaaagtattgaaaaactttgaatttcaaagaaaattgaatataaatttaaagaaacaact
gaagattgtcgaattattgttggtttatatgatgaagacatgataactgcacatgaaatt
ttaattttggcaaaacgttatcatcggccagttattacctatggccgcacttattcgcaa
ttaataaatctagttgccaaaattaatccggaactgcaatgaccagaatttattgattat
cgtttagctaatgatgttaaaaacgcggttatattagtaacaggcgctattgagcgttta
tatttaagatttattaggatagcatcaaataatgatgtttatttgaagttaaaaaataat
gatgcagtgattgtcgtagcccctccagtgaatgggttagaagtaaattatgctttaacg
ctggatgaaattgctagaaacacttcgaatttaattgaattaggatcggatcaatactat
ccatgtaatcctgcaaaggaagatattcgcaatattattaaaatgttaaagcctaaatat
tacattccaattcaaggtctatatcgctatttagttgtcgcaacacacgtagctagagaa
gcaggcatgaatttaaataattgtttagttttgcaaaacggaaaaattgccgaatttgaa
aatggtgaattaattagccaaaaacatagtattagaacggttggcgatgttgttattgac
gggcttggcatcggcgatatctcgcatgaagtaataaatgaacgtgaaagtcttgcaaga
gatggtattattacgattagctctttagtggattataagaaaaaaactccaattaatgaa
ttacaaatttcatcttatgggataattacaaaagaaaataaagaaacaatatataaaatt
attaacgatttgttttacaaagaatttgacgataagaaaccaaacgaaattgatttaaaa
gaaattaaagaaaaattaagaaaatcaattaaacggaaaattgcaaaagcaattgataaa
gaaccaatgactgttattaccctatatgaaatttaa
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