Mesorhizobium erdmanii: EB233_31040
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Entry
EB233_31040 CDS
T06791
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
merd
Mesorhizobium erdmanii
Pathway
merd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EB233_31040 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
merd03000
]
EB233_31040 (nifA)
Transcription factors [BR:
merd03000
]
Prokaryotic type
Helix-turn-helix
Other families
EB233_31040 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA_2
Mg_chelatase
AAA
AAA_3
AAA_16
MCM
TIP49
BrxC_BrxD
AAA_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QKC79341
UniProt:
A0A6M7UQ39
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All DBs
Position
6358333..6360093
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AA seq
586 aa
AA seq
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MAHMLPDQVGEIASRNTPPEPAVEAVSNADSLLRGIYEISKILTAPAQLEITLANVANIL
SSFVQMRHGAIVVLDAEGEPQISATTGGTVPQSAAGSVIPQAVIDKIVATGLPIVIQDTS
TSELFQADPRSNSGTIATAFIGVPLKAEEKIFGTLSIDRVRNGTTRFHYEEDLSFLAMVA
NLVGRTIRLHRTLSTCRQRLVEKQPRPEQSLDEDRTHPARHPHVKIDGIIGESPALKQVL
DIVSVVARTNSTVLLRGESGTGKEFFAQAIHKLSHRKDKSFVKLNCAALPESVLESELFG
HEKGAFTGAILQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTRTLK
VDVRLICATNKDLETAVRNGEFRADLYYRINVVPIVLPPLRERPGDIPRLAKALLERFNK
ENHRDLAFTPSALDLMSQCYFPGNVRELENCVRRTATLARSTTITASDFACKNSQCLSAL
LWKGVGRSHGGYAVDEFPRANVMPAGSRPSPMRVGASQNEASPGETCDPHHPVCPAMNPR
LTERDRLIDAMERAGWVQAKAARVLGLTPRQVGYALRRHRIGVKKF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctcacatgcttccagatcaggtcggtgaaatcgcatctcggaacaccccgcccgaa
cctgcggtcgaagcggtgagcaatgcggacagcttgctcaggggaatctacgagatatcg
aagattctgactgccccggcccagctggagattacgcttgccaatgtcgcgaatatcctc
tcctcgtttgtgcaaatgcgtcatggcgcaatcgtcgtcctggacgctgaaggagagccg
cagattagcgcaactaccggcggcactgtgcctcaatcagccgccggcagcgtcattccc
caggccgtaatagacaaaatcgtcgctaccggattgccgatcgtcatacaagacacaagc
acgtccgagctatttcaggctgatcctcgatcgaacagcggcacgatcgcaactgccttt
atcggtgtcccgctaaaggctgaggaaaagatcttcgggacgctgtcgatcgaccgcgtc
aggaacggtaccaccaggttccactacgaggaggacttaagcttcctggccatggtcgcc
aatctggtcggccggaccatccgcctccatcgcactttgagcacatgtcgtcagcgactt
gtggaaaagcaaccgagaccagagcagtcgctcgacgaggacaggacccatccggcccga
catccgcatgtcaagatcgacggaattatcggagaaagtcccgccctcaagcaagtcctc
gatatcgtctcggtcgtggccaggaccaattccaccgtgcttctgcgaggcgaaagcggt
accggcaaggagttctttgcacaggctatccataagctttcacatcggaaggacaaatcc
ttcgtcaaattgaactgcgccgcactgcccgaaagcgttttggaatcagagctctttggc
cacgagaaaggcgccttcaccggggctatcctgcagcgcgctggccggttcgaattggcg
aatggcggaaccctgctgcttgatgaaatcggcgagatttcgcctgcctttcaagccaag
ctgttgcgcgtcttgcaggaaggagaactggagcgagtgggcggcaccaggaccctcaaa
gttgacgtgcggctcatatgcgccaccaacaaggacctcgagacggctgtccggaatgga
gagttcagggctgacctctattaccgcatcaatgtggtgccaatagtcctgcctcccctc
agagaacggccgggcgatattccacgccttgcgaaagctctcctcgagcgattcaacaag
gagaaccatcgcgatcttgcattcacgccgtcggcgcttgacctaatgtcgcaatgctat
ttccctggcaacgtgcgtgagttggagaattgtgtgagacggacggccacacttgcgcgt
tcaacgacaataactgcgtcggatttcgcctgcaagaacagccagtgcttgtctgcgctt
ctgtggaaaggagtcggccgttcgcatggcggctatgccgtcgacgagttcccacgtgcc
aatgtgatgccggctggatcgcggccgtctcccatgcgggtcggcgcctcacagaatgag
gcatcgcccggcgagacctgcgacccccaccatcccgtttgtcctgcaatgaacccgcgt
ctgacggaacgcgaccggctgattgatgcgatggagagggccggctgggtacaggccaag
gcggctcgtgttctcggtctcacgccgcggcaggtcggctatgctttgcgccggcatcgt
atcggagtgaagaagttctaa
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