Methanogenium sp. S4BF: L1S32_01335
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Entry
L1S32_01335 CDS
T09590
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
mesb
Methanogenium sp. S4BF
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesb03016
]
L1S32_01335
Enzymes [BR:
mesb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
L1S32_01335
Transfer RNA biogenesis [BR:
mesb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
L1S32_01335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
WFN34794
LinkDB
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Position
274425..276005
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AA seq
526 aa
AA seq
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MQDNDIFREIISRLSFPGITSSDVQKVKIQVAKKYGLSEIPKNSVILAAATDDEFESMRL
ILQVKPTRTLSGVAPVAVMTSPHPCPHGICLPCPGGPDHPFGSPQSYTGEEPAALRGCQY
EFDPYVQVRQRILQFEELGHHIDKIELIVMGGTMTARDPAYQESFMSACIRAMNEYGGAV
SPDDCSTYEELCRRNETARARCIAATFETRPDWCKKDHIDRMLSLGVTKVELGVQQLKDE
ILEFNRRGHGIADSVAANALLRDAGIKVGFHVMPNLPSATMDDDRRMFEELFRDPSFRPD
FLKIYPTLVTPGSEIEALWQAGGYTTYPEDDLIDLIAFGKSCIPEYTRLQRVQRDIPARL
IVSGSHHSNFRQLAQKRLHEMGESCRCIRCREAGRAPVNGGAVIETMTYECCGGTEHFIS
VTASDSLIGFVRLRYPGNPWRTELSGCALIRELHVYGSLVPLEKTGNGSGEWQHRQYGAC
LLKAAEELAASDGYLSVAVMSGIGVRPYYARHGYERSGPYMIKRLG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaatgatattttccgggaaatcatttcccggctctcttttccaggaattaca
tcgtcagatgttcagaaggtaaagattcaggttgccaaaaaatatgggctgtctgaaatt
cccaaaaattctgtcatacttgcggctgcaacagatgatgagtttgagtcaatgcgttta
attcttcaggtaaagccaacccggacgctttccggtgtggcacctgttgcggtgatgacg
tctccccatccgtgtcctcatggcatatgtctgccctgtccgggtgggccggatcatccg
tttggatccccccagagttataccggagaagagcctgcggcacttcgcgggtgtcaatat
gaatttgacccttatgtgcaggttaggcagaggattcttcagtttgaagaacttggtcac
catattgacaaaattgaactgattgtgatgggcggcaccatgacggcccgtgacccggcg
tatcaggaatcgtttatgagcgcatgcattcgtgccatgaatgagtatggcggtgctgtt
tctcccgatgactgctctacgtatgaagagctatgccgcaggaatgagacagcccgggca
cgctgtattgcagccacattcgaaacccgtccggactggtgcaaaaaagatcatattgac
cgcatgctctcactcggggtgacaaaggttgaactcggtgtacagcagctgaaagatgaa
attcttgaatttaaccgccgtggccatggaattgcagattctgtcgctgctaatgccctg
ctgcgggatgccggtatcaaggtgggttttcatgtcatgccgaatcttccttcggcaacg
atggatgatgaccgccggatgtttgaagagctctttcgtgatccctcattccggccggat
tttctgaagatttatccgacacttgtaaccccgggttcagagattgaggcgctgtggcag
gctggaggatatacgacatatccggaggatgatctgattgacctcattgcatttggtaaa
tcatgcattccggaatacactcgtctccagcgtgttcagcgcgacatcccggcacggctc
attgtctcaggttctcaccacagcaatttccggcagcttgcccagaagagacttcacgaa
atgggcgaaagctgccgctgcatcaggtgcagggaggcaggccgtgctccggtcaatgga
ggggctgtgattgagacgatgacgtatgaatgctgcggcgggacagaacatttcatctcg
gtaacggcgtccgattcactgattggatttgtccgcctgcggtatcccggtaatccctgg
cgtacagaactatccgggtgtgcgcttattcgtgaacttcatgtatacgggtctctggtc
cccttggaaaaaaccggtaatggatcaggagagtggcagcaccggcagtatggtgcgtgc
cttttgaaagctgcagaagaattggcagcatcggacgggtatctctcggttgccgtgatg
agcgggattggagtccggccgtattatgccagacacggatatgaacgatcaggtccatat
atgattaagaggcttggatga
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