KEGG   Methanogenium sp. S4BF: L1S32_04455
Entry
L1S32_04455       CDS       T09590                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
mesb  Methanogenium sp. S4BF
Brite
KEGG Orthology (KO) [BR:mesb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mesb03016]
    L1S32_04455 (truD)
Enzymes [BR:mesb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     L1S32_04455 (truD)
Transfer RNA biogenesis [BR:mesb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    L1S32_04455 (truD)
 Prokaryotic type
    L1S32_04455 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: WFN35374
LinkDB
Position
916306..917574
AA seq 422 aa
MKQSPYPVEQTLGMQYYVCDNEGIQGLLRQEAEDFIVHEINNPVQSSGKYLICSLEKKNW
ELQRAVKEIAKILGISHRRISWAGTKDKHAVTTQLISLYDIAETDIENIHLKDITLTPVG
RSDQQLSLGDLQGNRFEITLRSCISGNLTEAVAQADSCVKTGVPNYFGIQRFGVQRPVTH
LVGKQILLEDYKEAVRTYVGFPSEGEPESVAKARTDYLSDNDPKKALENLPVQMRYERAI
LHHLAERPEDYEGALKRVPPKLLSMFVSAYQSWLFNMGLSHRIQMGYALSEPAPGDRILF
QNGKTDIVGESNAAQAAVLIRRGRAHICLEMPGEKTVPTGSPSEQHISSLMEADGISYAS
FRKAGELTDMSFKGALRMISVSTTVESEVCDDIVRLSFSLGPGQYATTICREYMKADPVR
MI
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaacaatcaccatatcctgtcgaacagacacttggcatgcagtattatgtctgtgac
aatgaaggcatccagggtctcttacgccaggaagcagaagacttcattgtgcatgaaata
aacaacccggtacagtcatccggaaaatacctgatctgcagtctggagaagaaaaactgg
gagctccagcgtgcggtgaaggaaattgccaaaatactcggcatcagtcatcgccggatc
tcgtgggcagggaccaaagacaaacatgctgtcaccacccagctgatatccctgtatgat
atcgcagaaactgatatcgaaaatatccacctgaaggacattaccctgacgccggttggc
agatctgatcagcagttatcactgggagatctgcagggaaaccgctttgaaattaccctg
cgttcatgcatctcaggcaacctgaccgaggcagtcgctcaggcagattcctgtgtcaaa
acaggagtccccaattattttggaattcagcggtttggtgttcaacgaccggtcactcat
cttgtgggtaaacagattctgctcgaggactataaagaggcagtcaggacatatgtggga
ttcccttcagaaggagagcctgagagtgttgcaaaagcccggacggattatctctcagac
aatgatcccaaaaaagcccttgaaaatcttccggtccagatgaggtatgaacgcgccatc
ctccatcaccttgcagaaaggccggaagactatgaaggtgcactcaaacgtgttccccca
aagctcctctcgatgtttgtttcagcatatcagtcatggctttttaacatgggcctttcc
cacagaattcagatggggtacgccttgtctgaaccggcaccgggagacagaatcctgttt
cagaacggaaaaactgacatcgtcggggaatcaaacgccgcccaggcagcggtgctcatc
agacggggccgtgcccacatctgccttgagatgccgggtgaaaagaccgtacccaccggg
agcccgtctgaacagcacatatccagcctgatggaggcagacggcatatcctatgcatca
ttcagaaaagcaggggaattaaccgacatgtcatttaagggggcattacgcatgatcagc
gtcagcaccacggttgaatcggaggtatgtgacgatatcgtgcgcctctcattctcactt
gggccgggacagtatgcaaccaccatctgcagggaatatatgaaggctgatcccgtccgg
atgatttaa

DBGET integrated database retrieval system