Manihot esculenta (cassava): 110603092
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Entry
110603092 CDS
T05761
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110603092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110603092
03051 Proteasome [BR:
mesc03051
]
110603092
Membrane trafficking [BR:
mesc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
110603092
Proteasome [BR:
mesc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110603092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
PCRF
Rad60-SLD_2
Dsc3_N
TBK1_ULD
XPC-binding
Motif
Other DBs
NCBI-GeneID:
110603092
NCBI-ProteinID:
XP_021596733
LinkDB
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Position
1:34121181..34127907
Genome browser
AA seq
548 aa
AA seq
DB search
MGGGNGAADEVSESNGGGDEVTVNIRCSNGSKFSVGISLSSTVEAFKAVLAGKCDVPADQ
QRLIYKGRILKDDQTLHSYGLEADHTVHLVRGFAPTAAANAAPASNTGAPNAASANAQAV
GSNEGGALGGSGFGASLFPGLGLNGLGGSGGMFGAGLPEFEQVQQQLTRNPNIMREIMNM
PVIQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMAGNTGGDNANPFAALLGNQAAAG
STNPSTTSSQSTTGSPAPNTNPLPNPWTAAGTAGAQTNTTRPNTTGDARPPAPAGLGGLG
LPEFDNMFGAMPDANLMSQMLQNPGISQMMQSLLSNPQYMNQILGANPQFRSMLDSNSQF
REMMQNPEFLRQLTSPETMQQLLTFQQALLSQLGRQQSNQEPSQTGVGTGTPNNMGLEML
MNMFGGLGAGSLTVPNRPNVPPEELYATQLSQLQEMGFFDTQENIRALIATAGNVHAAVE
RLLGNSGQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggcaatggagctgcagatgaggttagcgaatccaacggcggtggggatgaa
gtcaccgtcaatattagatgctctaatggatcaaaattttctgttgggataagcctatcc
tcgacggttgaagcgtttaaggcggtacttgcagggaagtgcgatgtgccggccgatcaa
cagcggctgatttacaagggtcggatcttgaaggacgaccagaccctgcatagctatggc
ttggaggcagatcacactgtccacttggttcgcggttttgcaccaactgcggcggccaat
gcagctcctgctagcaatactggagctccaaatgctgcttcagctaacgcacaggctgtt
ggttccaatgaaggaggagcacttggaggatctggttttggagcttcactatttccagga
cttggtttaaatggcttgggtggcagtggtggtatgtttggagctggacttccagagttt
gaacaggtgcagcaacaattgactcggaatcctaacatcatgagggaaatcatgaatatg
cccgttattcagaacctaatgaataaccctgagatcatgcggaacttgataatgaacaac
cctcaaatgcgtgaaatcattgatcgaaatcctgagctagctcatatactcaatgatcca
agcactctccgtcaaacacttgaagcagcaagaaatcctgaactcatgcgtgagatgatg
cgcaacaccgacagagcaatgagtaacattgaatcttcacctgaaggattcaacatgctt
aggcgcatgtatgaaactgttcaggagccttttttgaatgcaacaactatggctggaaat
actggaggtgataatgcaaacccatttgctgctcttctagggaaccaagctgctgctggg
tcaactaatccatcaactactagttcgcagtcgaccactggttctcctgctccaaatact
aatccactgcccaacccttggacggctgctgggacagctggtgcccaaacgaacactaca
cgaccgaatactactggggatgctcggccaccggcacctgctggactaggtggacttggt
cttccagagtttgacaacatgtttggtgcaatgcctgatgctaatttaatgagtcagatg
ttgcaaaatcctggcatttcacaaatgatgcaaagcctcctttccaatcctcagtatatg
aaccagattcttggagctaatcctcaatttcgcagcatgcttgattcaaattctcagttt
agagaaatgatgcaaaacccagaatttctccgtcaattgacttctcctgagacaatgcag
caacttttgactttccagcaagccctgctgtctcagcttggtcggcagcagtcaaaccag
gaaccgagtcagactggtgtaggaacaggaacacctaacaacatggggttagagatgttg
atgaacatgtttggtggccttggtgctggcagcctcactgttcccaacagacccaatgtg
cccccagaagagctttatgcaacccagttgtcacaactgcaagaaatgggtttcttcgac
acgcaagagaacatacgggcgctaattgcaacggcagggaatgtccatgctgcagtagag
agacttttgggaaattctggtcagtaa
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