Manihot esculenta (cassava): 110606674
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Entry
110606674 CDS
T05761
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110606674
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
110606674
NCBI-ProteinID:
XP_021601287
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Position
18:complement(6029914..6033630)
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AA seq
673 aa
AA seq
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MSGGCSIVWFRRDLRIEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLA
HLDSSLRSLGTPLVTKRSTDSVSTLLEVVKSTGATHIFFNHLYDPLSLVRDHRAKEILTA
QGIAVRSFNADLLYEPWDVNDAQGRPFTTFAAFWETCLSMPYDPEAPLLPPKRIISGDIS
RCPSDLLIFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS
FLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNHP
YSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRAFDRIDNPQFEGYKFDP
HGEYVRRWLPELARLPTEWIHHPWNAPESLLQAAGIELGSNYPLPIVGIDAAKVRLQEAL
SEMWQQEAAFRAAIENGTEEGLGDSSESAPFAFPQDMQMEETHELVRNNLPTTIRRYEDQ
MVPSITSLLRVEDQETSSDIQNVAEDSRGVVPRNVNVNQEQSRYALNQGAAQTIHGNNNL
PHFSVVSDPGNVEDSTAESSSSSRGIVPVWSPPTASYSDQFAGDENGIGTSSYLQRHPQS
HQIMNWRRLSQNG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgggtgtagcatagtctggttcaggagagatctgaggatagaagataaccca
gcactcgcagctggcgtaagagctggtgctgttgttgcagtgtttatatgggcacctgaa
gaggaaggccattattatcctggtagggtctcaaggtggtggctgaagcagagtttggct
catctggattcgtctttgaggagccttgggactcctcttgtcaccaagagatcaactgat
agtgtttctactcttcttgaggttgttaaatctactggtgctacccatatcttcttcaac
cacttgtatgaccccttgtcactggttagggatcaccgggcaaaggagattttgactgct
caaggaatagccgtaagatccttcaatgcagatttgctttatgaaccgtgggacgttaat
gatgcccaaggacgccctttcaccacctttgctgccttctgggaaacatgccttagcatg
ccttatgatccagaggctcctcttctcccaccaaagaggattatttcaggtgatatatcg
agatgcccttcagatttgttgatatttgaagatgaatctgaaaagggaagcaatgcactg
cttgctcgagcgtggtcacctgggtggagtaatgctgataaggctttgactacattcatc
aatggaccattaattgagtactccaagaatcgtaggaaggctgacagtgctacaacatct
tttctttctccccatttgcattttggggaggttagtgtcagaaaagtctttcaccttgtc
cgtattaagcaggttctttgggcaaatgaagggaacaaggcaggcgaagagagtgtaaac
ttgtttcttaagtcaattggtctgagagaatattcaagatacatgagttttaaccatcct
tacagtcatgaacgtccacttcttgggcaccttaaattttttccttgggtagtggatgaa
ggttattttaaggcttggagacaaggtagaactggttatccattagttgatgctggaatg
agagagttgtgggctactggttggctgcatgatcgaatccgagtagtagtttctagtttc
tttgtgaaagttctgcagcttccatggagatggggaatgaagtatttctgggatactctt
ttggatgctgatttagaaagtgatgctcttggttggcagtacatttccggtactctccct
gatggccgtgcctttgatcgcattgacaatccgcagtttgagggttacaaatttgatccg
catggagaatatgtaagacggtggcttccagaacttgccaggctaccaactgaatggata
catcatccatggaatgcacctgaatccttactccaagctgccggaattgagcttggatca
aattatcctctcccaattgtagggatagatgcagctaaagtcaggttgcaagaagcgctt
tcagaaatgtggcagcaagaagcagctttcagagctgccattgagaatgggactgaggaa
gggcttggagattcatctgaatcagccccgtttgctttccctcaagacatgcaaatggaa
gaaactcatgagcttgtaagaaataaccttcctactacgattcggcgttatgaggatcag
atggttccaagcattacttctttgctaagagttgaagaccaagaaacttcttcagatatt
caaaatgttgcagaagacagcagaggagtggtgccaagaaatgtaaatgtcaatcaagaa
caaagtagatacgctttaaatcagggggctgcacaaactattcatggtaacaataatttg
ccgcattttagtgttgtcagtgatccgggaaatgtggaagattcaacagcagaatcttct
agtagtagtagaggtatagttccagtctggtcccctccaaccgctagttactcagatcaa
tttgctggagatgaaaatggaattggaacaagttcttatttgcagaggcatccacaatct
caccagataatgaattggaggcggctctctcagaatgggtga
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