Manihot esculenta (cassava): 110611353
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Entry
110611353 CDS
T05761
Name
(RefSeq) dnaJ homolog subfamily C GRV2 isoform X1
KO
K09533
DnaJ homolog subfamily C member 13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110611353
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110611353
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110611353
Chaperones and folding catalysts [BR:
mesc03110
]
Heat shock proteins
HSP40 / DNAJ
110611353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
110611353
NCBI-ProteinID:
XP_043810816
LinkDB
All DBs
Position
3:complement(9303105..9326492)
Genome browser
AA seq
2577 aa
AA seq
DB search
MEPSNNLSSSSSSPANSAPPLQEEPEYLARYLVVKHSWRGRYKRILCISNVSIITLDPNT
LSVTNSYDVGSDFDGASPIIGRDENSNEFNLSVRTDGKGKFKAIKFSSRYRASILTELHR
IRWNRLSPVAEFPVLHLRRRNGEWVPFKFKVTYVGVELVELKTGDLRWCLDFRDMNSPAI
ILLSDGYGKIASDCGGFVLCSLYGRKSKAFQAASGTTNKAIISNLTKTALSMAGVSLSVD
SSQTLTIMEYIKQRAKEAVGAEETPCGGWSVTRLRSAAHGTLNVPGLSLGIGPKGGLGEH
GDAVSRQLILTKVSLVERRPENYEAVIVRPLSAVSSLVRFAEEPQMFAIEYNDGCPIHVY
ASTSRDSLLAAVRDVLQTECQSPVPILPRLTMPGHRIDPSCGRVHLLVGPKRPIADMESA
SMHLKHLAAAAKDAIAEGGSIPGSRAKLWRRIREFNACIPYSGVPPNIEVPEVTLMALIT
MLPATPNLPPESPPLPPPSPKAAATVMGFIACLRRLLASRSAASHVMSFPAAVGRIMGLL
RNGSEGVAAEAAGLIATLIGGGPTDPSLLTDSKGERHATIMHTKSVLFSHNGYVIILANR
LKPMSVSPLLSMTIVEVLEAMICDPHGETTQYTVFVELLRQVAGLRRRLFALFAHPAESV
RETVAVIMRTIAEEDAIAAESMRDAALRDGALLRHLLHAFYLPAGERREVSRQLVALWAD
SYQPALDLLSRVLPPGLVAYLHTRSDGLQLEEVNREGSLISRRQRRLLQQRRGRAGRGIT
SQDPVNYEVGDSVIQANAGGLKGSDNYQKTAVDPISGQFSTLQTVENLTSDTPSSGVLQN
DHSPASADKPSTDVHVTTEPNVSNSVDFDSHVAGFQNSDLPAPAQVVVENTPVGSGRLLC
NWHEFWRAFSLDHNRADLIWNERTRQELREALQAEVHKLDVEKERTEDIVPEGASVEMIT
GQDSVPQISWNYSEFSVNYHSLSKEVCVGQYYLRLLLDSTSSGRAQDFPLRDPVAFFRAL
YHRFLCDADTGLTVDGAVPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQH
YITIGPFEGAAHITVLLDRTDDRALRHRLLLLLKVLMKVLSNVEACVLVGGCVLAVDLLT
VVHEASERTAIPLQSNLLAATAFMEPLKEWMFTNKDGEQVGPVEKDAIRRFWSKKEIDWT
TKCWASGMVEWKRLRDIRELRWALAVRVPVLTSFQVGDAALSILHSMVAAHSDLDDAGEI
VTPTPRVKRILSSPRCLPHIAQAMLSGEPAIVEAAAALLKAVVTRNPKAMIRLYSTGAFY
FALAYPGSNLLSIAQLFAVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLER
SGPAAFAAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYDYAPMPP
VTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLVMWREELTRRPMDLSEEE
ACRILEVSLEDVSSEDAKKHSFGTSEVTGILKQIGSIDEEKLKRQYRKLAMKYHPDKNPE
GREKFLAVQKAYECLQASMQGLKGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYPMLL
NAVTVDNADNDFLSSDRAPLLVAASELTWLTCASSSLNGEELVRDGGIQLLATLLSRCMC
VVQPTTSPSDPSAIIVTNVMRTFSVLSQFESARAEMLELSGLVDDIVHCTELELVPDAVD
AALQTIAHVSVSSGLQDALLKAGVLWYLLPLLLQYDSTAEESDKTESHGVGSSVQIAKNM
HAIRASQALSRLSGLCIDGSSTPYNAAAADALRALLTPKLASMLKEQLPKELLSKLNTNL
ESPEIIWNSSTRAELLKFVDKQRANVGPDGSYDLKDSQIFAYEALSTELVVGNVYLRVYN
DQPEFEISEPEAFCVALIDFISFLVRNKFPFASDAQSKPSSSSSSLETSEIQNNITDESI
NGQAPDDSSAVSDGKSTDNEELKLVKNLKLGLTALMNLLTSNPNLASIFSSKEKLLPLFE
CFSVPIASESNIPQLCLGVLSLLTTYAPCLEAMVADGSSLLLLLQLLYSSPNCREGVLHV
LYALASTPELAWAAAKHGGVVYILELLLPLQKDIPLQQRAAAASLLGKLVGQPMHGPRVA
ITLARFLPDGLVSIIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQIATMASDLYRE
QMKGRVVDWDVPEQASGQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSS
IAATHYDAQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEARREAMS
SEEVKNGNYAEKTYEADDGSVPPAQTPQERVRLSCLRVLHQLAASTICAEAMAATSAGSP
QVVPLLMKAIGWQGGSILALETLKRVVVAGNRARDALVAQGLKVGLVEVLLGILDWRAGG
RNGLCSQMKWNESEASIGRVLAIEVLHAFATEGAHCNKVREILNASEVWSAYKDQKHDLF
LPSSAQSAAAGVAGLIENSSSRLTYALTAPPPQPTQARPPAPAPTAFDSNGKEDQFS
NT seq
7734 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctctaataatctctcctcctcttcttcttctcctgccaattctgctcctccc
ctccaggaagagcctgagtacctcgcccgataccttgtcgttaaacactcatggcggggc
cgatacaagcggattctgtgtatttccaatgtttctattattactctggaccctaacact
ctctctgtcaccaactcctatgatgtagggagtgatttcgacggggcttctcctattatt
ggtcgcgatgagaattcgaacgagttcaatttgagtgttaggactgatgggaaaggtaaa
ttcaaggcgattaagttttcgtccaggtatagagctagtattcttacagagttgcataga
atacgctggaataggctaagtcctgtggcggagttcccagtgctgcatcttaggagaagg
aatggcgagtgggtgccttttaaattcaaagttacttatgtgggggttgaactggttgaa
ttaaaaactggggatctacgctggtgcttagattttagagacatgaattcccctgctatc
attctcctttccgatggttatggaaagatagcaagtgattgtggaggttttgttctttgc
tctttatatggaagaaagtctaaagctttccaagctgcttcagggacaaccaacaaggca
attatctcaaacttgactaaaactgcactatcaatggctggggtttcactctccgtggac
agttcgcaaaccctgactataatggaatatatcaagcagagggcaaaggaagcagttggt
gcagaagaaaccccttgtgggggttggtctgtaacaaggttacgttctgctgctcatgga
actttaaatgttcctggattgagtctgggaattgggccaaaaggtggacttggagagcac
ggcgatgctgtctctcgtcaactcattctaacaaaggtttcactcgttgaaaggcgacca
gaaaactatgaagctgttattgttcgtcctttatctgcagtaagctcacttgttcgattt
gcggaggagccccaaatgtttgctattgagtacaatgatggttgtcctatccatgtttat
gcaagcacgtctcgtgatagtttacttgctgcagttcgggatgtgttgcaaacagaatgt
cagagcccagtacctatactacctaggttgactatgcctggtcatcgtattgatccatct
tgtgggagagtgcatttattagtaggaccaaagcgcccaattgctgacatggaaagtgca
tccatgcatttgaaacacttagctgcagctgctaaagatgctattgctgaaggtggttca
attcctggttcgagagcaaaactgtggcgtagaataagggagttcaatgcttgtattcca
tatagtggagttcctcctaatatagaagtgcctgaggtaactttgatggccttgattaca
atgcttccagctacaccaaatcttcctccagagtctcctcccttgccacctccttctcct
aaagcagctgcaacagtgatgggtttcattgcatgtttgcgtagattattggcttctaga
agtgcagcttcacatgtgatgtcttttcctgcagctgttggaagaattatgggtttactt
agaaatggttctgagggtgtagcagctgaagctgcaggacttattgcgactcttattggt
ggtggtccaacagatcctagtttattaacagattctaaaggagagcgtcatgccacaata
atgcacacaaagtctgttttgttttctcataatggttatgttattatccttgccaacaga
ttgaaacccatgtctgtatcacctttattgtcaatgactattgttgaagttcttgaggct
atgatatgtgatccacatggtgaaactactcagtacacagtttttgttgaattgttacga
caagtagctggtttgcggcgtcgtttatttgcattgtttgcacatcctgctgaaagtgtg
agggaaacagttgcggtgatcatgcgcacaattgcagaagaagatgcgattgcagcagag
tccatgcgtgatgctgctttgcgtgatggtgctttgctgagacatttattgcatgctttt
taccttcctgctggtgagcgtcgtgaggttagtcgacaacttgttgctctttgggctgat
tcatatcaaccagctttagatctattgtctagggttctgcctcctgggcttgttgcttat
ttgcacactcgttctgatggacttcaacttgaagaggtaaatcgagaaggatcattgatc
agtaggagacagcgacggttacttcagcagaggagaggtcgtgctgggagaggaataaca
tctcaagatcctgttaattatgaagttggagattcagtgatacaggcaaatgcaggtggt
cttaaaggatcagataactatcaaaaaactgctgtagatccaatttctggacaattttct
actcttcaaacagttgaaaatttgaccagtgatactccctcttcaggggttttgcaaaat
gatcattcacctgcttcggctgataaaccttcaaccgatgtgcatgtgacaacagaacca
aatgtttctaattcagttgactttgattctcatgtggctggtttccagaacagtgacctt
ccagctcctgcacaggttgtggtggagaacacacctgtgggttctggtcggctactctgt
aattggcatgaattttggcgagcatttagccttgatcacaatcgggcagatctaatctgg
aatgagcgaacaaggcaagaattgagggaggccttgcaggctgaggttcataaactagat
gttgagaaggaacgtactgaagatattgttccagaaggagcttcagttgagatgatcact
gggcaagatagtgtgccacaaatatcttggaactattcagagttctctgtgaattatcat
agcttgtccaaagaagtttgtgtaggtcaatactatctgcgtttgcttcttgatagtact
agcagtggcagggcacaggattttccgctgcgtgatccagtagctttctttagggcacta
tatcatcggtttttgtgtgatgctgacactgggcttacagttgatggtgctgttcctgat
gaactgggtgcatctgatgattggtgtgatatgggaagattagatggttttgggggaggg
ggaggctcttcagtaagggagctttgtgcaagagcaatggccattgtctatgaacaacat
tacattacaataggtccttttgagggtgctgcacatattacagtacttctagataggaca
gatgatagagctttgaggcaccgtcttctccttctcttgaaggttttaatgaaggttttg
tctaatgtagaggcttgtgttttagttggaggttgtgtattagctgttgatttgctgaca
gtggttcatgaagcttcagaaagaactgctatccctttacaatctaatttattagctgct
actgctttcatggagccacttaaagaatggatgtttacaaacaaggatggtgaacaagtt
ggacctgttgagaaggatgccatcagaaggttttggtcaaaaaaagaaattgactggaca
acaaagtgctgggcatctggaatggtggagtggaagagattgcgtgatattcgcgaactt
cgttgggcgttagctgtgcgtgttccagtgctcacatcatttcaggtaggagatgcagca
ttgtccatattacatagcatggtagctgcacattctgacttagatgatgctggagagata
gttaccccaacaccaagggtaaagcgtatcctttcaagtcctcgttgtcttccacatatt
gcacaggcaatgctttctggggaaccagcaattgtggaggctgctgcagcattgctgaag
gctgttgttaccagaaatcccaaggctatgatacgcctttacagcacaggagccttctat
tttgcgctagcataccctggatccaatctactttccattgcacaactctttgctgtgact
catgtccatcaagcattccatggtggtgaagaagctgctgtttcctcatcattgcccctt
gcaaagcgcagtgtgttgggtgggcttcttccagaatctttgctgtatgtactggagcgt
agtggtccagctgcatttgctgctgcaatggtttcagattctgatactccagagattata
tggacacacaaaatgcgagcagaaaatctgattcgtcaggttttgcagcatctgggagat
tttccccagaaattgtcacagcactgtcattctttatatgactatgctcccatgccacca
gtgacgtacccagagcttagagatgaaatgtggtgtcatcgatattatcttcggaacttg
tgtgatgagattcgcttcccaaattggccaattgttgaacatgttgagtttctgcagtca
ttattagtaatgtggcgcgaagagttaacacggagacctatggatctttcggaagaagaa
gcttgcagaatattggaagtatcattggaagatgtctcaagtgaagacgctaaaaagcat
tcttttgggacttctgaggtgactggcatattgaagcaaattggaagcattgatgaagaa
aagctcaagcgacaatacaggaaacttgcaatgaaataccatcctgacaagaaccctgaa
ggaagggagaagtttcttgctgtacagaaagcctatgaatgccttcaggcttccatgcaa
ggcttgaaaggtcctcagccttggaggttactgcttttattgaaaggacagtgcatctta
taccgaagatatggggatgtgctggagccttttaaatatgctggctatcccatgttgctt
aatgcagttactgtggacaatgctgacaatgattttctatcttctgatagagcacctttg
cttgttgcagcatcagagcttacttggctgacgtgtgcatcttcttcactgaatggtgaa
gagcttgtaagggatggagggatacaactccttgcaactctcctttctcgttgcatgtgt
gtagttcagccaactacttctccaagtgacccatcagctattatagtcacaaatgtgatg
cgaaccttttctgttttgagtcagtttgagagtgctagggctgagatgcttgaattatct
ggattagttgatgacattgtacactgcactgaacttgagcttgtacctgatgctgttgat
gctgccctccagacaattgcacatgtttctgtgtcctctggattgcaggatgccttactg
aaggcaggtgtgctttggtaccttttgccattgttgcttcagtatgactcgaccgctgaa
gaatctgataagacagagtcacatggtgttggttctagtgttcaaattgctaaaaatatg
catgctattcgagcatctcaggccttgtccagactgagtggtttgtgcattgatgggagt
tcaacaccttataatgcagctgctgctgatgcacttagagctttgctaactcctaaactt
gcaagtatgttgaaagaacaattaccaaaagaattgctatccaaattaaacactaatttg
gagtctccagagattatctggaactcttcaactcgagcagaactactgaagttcgtcgat
aagcaacgtgctaatgtggggcctgatggttcatatgacttgaaagattcacaaatcttt
gcatatgaggcattatcaacagaacttgttgttggcaatgtctacttgagggtctataat
gatcagcccgagtttgagattagtgaacctgaagctttttgtgttgctctaattgatttc
atatcatttctagttcgcaacaaatttccttttgcttctgatgctcaaagtaaacctagt
tccagcagctcgtcacttgagacatcagagatccaaaataatattactgatgaatctata
aatggacaagcacccgatgactcatcagcagtctcagatggaaaatcaactgataacgaa
gagttgaaactggtcaaaaaccttaaactgggattgactgcgcttatgaacttattgaca
agtaatccgaatttggcatccatattttcttctaaagagaagctactacctctctttgaa
tgtttctcagtacccattgcatcagaaagcaacattcctcaactttgccttggtgttctt
tctctcttgaccacatatgctccttgcttggaggctatggttgcagatggatctagtctc
ctccttttattgcaattgctttattctagtccaaattgccgtgaaggggtccttcatgtt
ctttatgctttggcaagcactccagaacttgcttgggccgctgccaagcatgggggagtg
gtgtatattctggagcttctgttgcctctgcaaaaagatattcccttacaacagagagcg
gcagctgcctcattactggggaagcttgttggtcagccaatgcatggacccagagttgct
attacactggcaaggtttctccctgatggtcttgtatcaattattagggatgggcccgga
gaggctgttgtatctgcactggaacagacaacagagacaccagagcttgtgtggactcct
gccatggcagcatctttgtctgctcaaattgctactatggcatcagacttgtaccgtgaa
cagatgaaaggccgtgttgttgattgggatgttcctgagcaggcttctggacaacaggaa
atgcgggatgagccacaggttggtggaatctatgtcaggctgttcctaaaggatcctaaa
tttcctcttagaaatccaaagagattcttggaagggctactggatcaatatttgtcatcc
attgctgccacacattatgatgcacaagctattgatcctgagcttcccttacttctttct
gctgctttggtttcattattgcgggtgcaccctgcacttgcagatcatgttgggtatctt
ggttacgtgcccaaactggtagctgctgtagcatatgaggcaaggcgagaagcaatgtca
tcagaggaagtgaaaaatggcaactatgccgaaaaaacatatgaagctgatgatggatct
gtgccacctgcacaaactccacaggaacgtgtgagacttagttgtttacgtgtgctacat
cagcttgctgcaagtacaatatgtgctgaagccatggcagcaactagtgctggatcacct
caggttgttccacttttaatgaaagctataggatggcaaggtggaagtatattagctctc
gagacgctaaaacgtgttgtagttgctggaaatcgtgcacgggatgcactagttgcccaa
ggacttaaggtgggccttgttgaagtacttcttggcattcttgattggagagccggtgga
aggaatggactttgctctcagatgaagtggaatgaatctgaagcatctattggcagagtg
cttgcaattgaggttttgcatgcatttgcaacagaaggagcacactgtaacaaagtgcgt
gagatattaaatgcctctgaggtttggagtgcttataaagaccagaaacacgatctcttt
cttccttcaagtgctcaatctgccgctgccggagttgctggtctaattgagaattcatcg
tctagactaacatatgccctgacagctccgccacctcaacctactcaagcaagaccacca
gcacctgcacctacagcatttgactcaaatgggaaggaggatcagttttcatag
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integrated database retrieval system
