Manihot esculenta (cassava): 110611395
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Entry
110611395 CDS
T05761
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110611395
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110611395
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110611395
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110611395
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110611395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
110611395
NCBI-ProteinID:
XP_021607387
LinkDB
All DBs
Position
3:complement(20469363..20480045)
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AA seq
625 aa
AA seq
DB search
MGLQLQMSWQPSLLSQKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSL
CDSVSNGERKRECPFCILEKRIVRSLSLDLTLDAPAKIQSCLRIFAEHFRCGLQEDAHEF
LRYVIDACHNTCLRLMKLRRKGNDSFNGTNTVVREIFGGALQSQVKCLSCNSESNKVDEI
MDISLDVLHSNSLREAMQKFFQPEILDGSNKYRCENCKKLVTARKQMSILQAPNILVIQL
KRFEGTFGGKIEKAIAFDEVLVLSSFMCKGNQDLKPEYNLFGTIVHSGYSPESGHYYAYI
KDAMGRWYCCNDSYVTVSTLQDVLSEKVYILFFSRTNQRPLPSGATSGVKSSNFNGVGTS
KSPKIAVAPKCVDQSSCKDIPSMSKSDKVSSIRQIKLNGSGSSSRRVPPTVDRNADMHKS
RNMNMDGDAKDTVYMEKLDKDMSPIINGNGCSKNKIIVDETCPSIAGASENFITQNGALD
SVKPDLSEANGTMVKMVAEKGYNHLELQNSRENGHTGTSELKRKLEDSCILFAQDSHSRA
KVKELKEVLKQEASSVLRSCGWSNKVYSFMCSRKRLCARGARNIPTDIELKKLLITEAKS
TFISQIPESLKEDLIRHLRSFSQEK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggattgcaattgcagatgagttggcagccgagtttactgagtcagaaaaggaagaat
ggtccgcctttagggttgaaaaatctcggcaattcttgctatctcaatagcgtccttcag
tgcctcacttacactcctccccttgccaatttttgtctccgtttacagcattcttctctc
tgtgattcggtttctaacggggaaagaaagcgggagtgcccattttgtatacttgagaaa
cggatagtccgttccctaagcctggacctaacgcttgatgccccagcaaagattcagagc
tgtctcaggatttttgccgagcactttcggtgcggcctccaagaggatgcacatgagttc
ctgcgctatgtcattgatgcgtgtcataacacctgcttgcgactcatgaagctgcggcgc
aaggggaatgactcctttaatggcaccaacactgtcgttagggagatatttggaggtgct
ttgcagagccaggtgaagtgcttgtcatgcaattctgagtccaataaggttgatgagatt
atggacatcagtctcgatgtattgcatagtaattcgcttagagaagcaatgcaaaagttc
tttcagcctgagatcttggatggcagcaataagtacagatgtgaaaattgtaagaaattg
gtgacagcgaggaagcaaatgtcaattcttcaagcacctaatatcttggtaatccaactg
aagagatttgagggcacatttggtggcaagattgagaaggccattgcatttgatgaagtt
ttggtgctttctagcttcatgtgtaaagggaaccaggatctgaaaccagagtataatctt
tttggcaccattgtgcattcaggatactcaccagaatctggacactactatgcatatatc
aaggatgcaatgggtcggtggtattgctgtaatgattcatatgtgacagtttcaacactg
caggatgtcttgtcagagaaagtctatattcttttcttctcacgcactaaccaaaggcca
cttccttctggtgctaccagtggagtaaaatcaagcaattttaatggcgttgggacatct
aaaagtccaaagattgctgttgcaccaaaatgtgttgatcaatcttcatgcaaggatatt
ccatccatgtctaagagtgataaagtgtcttctattcggcagataaagttgaatggttct
ggatctagctccagaagggttcctcctactgttgacagaaatgctgacatgcataagagt
cgaaacatgaatatggatggggatgctaaggacacagtttatatggagaaacttgataag
gatatgtcaccaataataaatggaaacgggtgcagcaaaaacaaaatcattgttgatgag
acctgtccatccattgcaggagcaagtgaaaactttattactcaaaatggtgccttagat
tcagtaaagccggatctctctgaagctaatggtactatggttaagatggtggcagaaaaa
gggtataatcaccttgaattgcaaaacagtagagagaatggccacactggcacttcagag
ttaaagaggaaattagaggactcttgcattttgtttgcacaggattctcattctcgagcc
aaagtcaaagagttaaaagaagttctcaagcaagaagcttcttcagttttgcgatcatgt
ggctggtcgaataaggtatacagttttatgtgttcgaggaagaggttatgtgcacgagga
gcaaggaacatcccaactgatattgaattaaagaagctcttgatcacagaggctaaatca
acctttatttcacagatacctgaatcattaaaagaggatctaattagacatctccgttca
ttcagccaagagaagtga
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