Manihot esculenta (cassava): 110614340
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Entry
110614340 CDS
T05761
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110614340
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110614340
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110614340
NCBI-ProteinID:
XP_021611549
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Position
5:complement(31019491..31022100)
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AA seq
366 aa
AA seq
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MAVQWNFALALSIVIFNFISPTFCVAQKMNPIDSCWRQNRNWRRSRQQLATCSVGFSGKM
TNNIGKDTIRYKVSDPSDDPLNPKQGTLRYGATMITGKVWITFQKNMNIQLVKPLLISSF
TTLDGRGVDIHITGNACLLVYKATDVIIHGLRIHHCKAVGPASVRGPNGEMVPLGQMDGD
AIRLVTASKVWIDHNTLYSCQDGLLDVTRGSTDVTISNNWFKDQDKVMLLGHDDGYLRDK
NMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNLYQGWEQYAIGGSMNPSIKSEANYFIAP
KSGNKEITWRNGINEKSKPWNFYSVGDVFENGASFIQTGLSGANPNYNNQQRFTVANAKS
VPFITK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacaatggaacttcgctttagctctttctattgtcatcttcaacttcatctct
ccgacattttgcgttgcccaaaagatgaatcccattgatagttgctggagacagaaccgt
aattggcgaagaagcaggcagcaactggccacttgctccgtggggttttcagggaagatg
actaacaacattgggaaagatactatccgctacaaagtgagtgatcctagtgatgatcca
ctgaaccctaagcaagggactctgagatatggagccaccatgatcactggaaaagtgtgg
ataactttccaaaagaacatgaacattcagcttgtcaagccacttctcattagcagcttc
accacactcgacggccgtggtgtcgacattcacatcactggcaacgcttgccttctggtc
tacaaggcaacagatgtgatcatccatgggctaaggattcaccattgcaaggccgtaggc
cctgcatcggtaaggggaccaaatggagaaatggtgcctctaggtcagatggatggggat
gcaatcagattggttactgcatcaaaggtttggatagaccacaataccctatattcatgc
caagatggtcttctggacgtgactcgaggatctacagacgttaccatctctaacaactgg
ttcaaggaccaagacaaggttatgcttcttggacacgatgatgggtacttgagagacaag
aacatgagagttactgttgtgttcaaccacttcggtccaaattgcaaccagcggatgcca
agggttcgccatggatatgcacacgtagccaacaacctgtaccaaggatgggaacagtat
gcaattgggggaagcatgaatcctagcattaagagtgaagccaactacttcattgcacca
aaatcaggaaataaagagataacatggagaaacggtataaatgaaaaaagcaagccatgg
aatttttattctgtgggagatgtatttgaaaatggagcctctttcatccagacaggttta
agtggggcaaatcctaactataacaatcaacaaaggtttacagttgcaaatgccaagtct
gtcccatttataacaaagtga
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