Manihot esculenta (cassava): 110615573
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Entry
110615573 CDS
T05761
Name
(RefSeq) endo-1,4-beta-xylanase 1 isoform X1
Organism
mesc
Manihot esculenta (cassava)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
110615573
NCBI-ProteinID:
XP_021613201
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Position
5:complement(30514579..30519155)
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AA seq
760 aa
AA seq
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MEQLLSSRIVILLLLVLLLGLSAESVVVPNQFYQIASKGHVAAADSIILNPRFEDGLNNW
SGKGCKIEVHESMGDGRIIPQSGKFFASATERTEKWNGIEQEITGRVQQHVAYEVVALVR
IYSDYITSAGVEVTLWVQEQDLREEYIAIANSQATDKDWVQLQGEFLLNSSPSRAVIYLE
GPPPGTDILINSLFVMHAEKNPTSSRPVSKNVPFGVNIIENSDLDDATAGWFPLGNCALS
VQTGSPHVLPPMASDSLGPYKPLSGRYIMVTNRSDSWMGPAQMITEKLQLYLTYQVSAWV
RIGAGATEPQILNVALSVDGQWVNGGEVESNDDKWHEIGGSFRIEKQASNVMVYVQGPAS
GVDLMVAGLHIFPVNRKARFKYLKQQTDKIRKRDIILKFSGSENSNILGNLVKVAQTQNS
FPLGSCITRTSMDNEEFLKFFIKNFNWAVFENEMKWSWTEPQEGKFDYREADELVDWCKN
HNIEIRGHCIFWEMEYAVQSWVRSLNESGLRTAVQNHLTDLLTRYKGMFKHYDVNNEMLH
GSFYKDRLGKDIRANIFKTANQLDPSANLFVNDYHIEDGIDIRSTPEKYIQQILDLQEQG
APVGGIGIQGHIDVPVGSIVSSALNKLGTLGLPIWFTELDVSSANEYIRADDLEVMLREA
YAHPAVEGVILWGFWELYMSRKYAHLVNADGKINLAGKRFLALKREWLSHARGTINQQGE
FRFRGFQGTYNIEVISSSKIVNRTFIVDKGDLPLILSIAL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattgctttcctctcgcattgtcatccttttgcttctggttttgcttctgggt
ctttctgcagaatcagttgtggttccaaatcaattttaccagattgcaagcaaaggccat
gttgctgctgctgatagcatcatattgaatcctagatttgaggatggccttaataattgg
tctggcaaaggctgcaagattgaagtacatgaatctatgggagatggaagaattattcca
caatcaggaaagttctttgcttctgcaacagaacgcacagaaaagtggaatggaattgag
caagagataactggaagagtgcaacaacatgttgcttatgaagttgttgccctagttcgc
atatatagtgattatatcaccagtgctggtgtagaagtcactttgtgggttcaagaacaa
gatcttcgcgaagagtacatagccattgccaactcacaggcaacagacaaagattgggta
caattgcagggggagttccttcttaatagttctccatctagagcagtaatatatttagaa
ggtccacctccaggcacagacattctgataaatagtttatttgtaatgcatgcagagaag
aaccctacttcatcccggccagtttctaagaatgtaccttttggagtgaatataattgag
aacagtgaccttgatgatgccaccgctgggtggtttcctcttggtaactgtgctttgagt
gttcagactggttccccacatgtactccctccaatggcaagtgattctcttggaccttat
aagcctctaagtggccgctacatcatggtaaccaatcgttcagattcttggatgggtcct
gctcagatgataactgagaaactgcaactctatttgacataccaagtatctgcttgggtt
cgaattggtgctggagcaactgaacctcagattttaaatgttgcacttagtgtggatggg
cagtgggtcaatgggggtgaagttgagtctaatgatgacaagtggcatgaaattggtggg
tcctttagaattgagaagcaagcatccaatgttatggtttatgtccaaggtcctgcttca
ggtgttgatttaatggttgcaggacttcatatttttcccgtaaaccgaaaggcaaggttt
aagtatttgaagcagcaaacggataagatacgtaagcgtgatatcatcctaaaattttct
ggatcagaaaatagcaatatccttggcaatcttgtcaaagttgcacagacgcaaaacagt
tttcctttgggatcatgtataactagaacaagcatggacaatgaagaatttttaaaattt
tttattaaaaattttaactgggctgtgtttgaaaatgaaatgaagtggtcctggacagaa
ccgcaagaaggtaagttcgactacagggaagctgatgagctagtggattggtgcaagaac
cacaacatagaaatccgaggtcactgtatcttctgggaaatggagtatgcagttcaatca
tgggttcgatccttgaatgaaagtggcttgaggactgctgttcagaaccatctcacagat
ctcctcacacgttacaagggaatgttcaagcactatgatgtgaacaatgaaatgctgcat
gggtcattctataaggatcgactgggtaaagatatccgagcaaacattttcaaaactgcc
aaccaactagacccatctgccaatctctttgtgaatgattatcacattgaggatggaatt
gacattagatcaacgccagagaaatacatacagcaaattcttgacctccaggagcaaggt
gctccagtgggaggaattggcattcaaggccatattgatgttccagtaggatccattgtt
tcttccgcactgaataaattaggaactcttggccttccaatctggtttactgaacttgac
gtgtcttcagctaatgagtatatcagagcagatgacttggaagtaatgcttcgtgaggcc
tatgcacatcctgcagtggaaggtgtgattctctggggattttgggagttgtacatgtcc
cgaaaatatgctcatctagtgaatgcagatggtaaaattaatctcgctggtaagagattc
cttgctctcaagagagagtggctgtctcatgctagggggactattaaccagcaaggagag
ttcagatttagaggttttcaagggacttacaacattgaagtgatttcatcatcaaagata
gttaacaggacatttattgttgacaagggtgatttgccactcattctttccattgcatta
tag
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