Manihot esculenta (cassava): 110616072
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Entry
110616072 CDS
T05761
Name
(RefSeq) ABC transporter B family member 13 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110616072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110616072
04147 Exosome [BR:
mesc04147
]
110616072
04090 CD molecules [BR:
mesc04090
]
110616072
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110616072
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110616072
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110616072
CD molecules [BR:
mesc04090
]
Proteins
110616072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
ABC_ATPase
AAA_22
AAA_21
Zeta_toxin
DUF87
RsgA_GTPase
AAA_30
AAA_23
AAA_7
P-loop_TraG
AAA_15
AAA_24
nSTAND1
Motif
Other DBs
NCBI-GeneID:
110616072
NCBI-ProteinID:
XP_021614081
LinkDB
All DBs
Position
5:complement(24708099..24713465)
Genome browser
AA seq
1246 aa
AA seq
DB search
MEGMELASDQISDENSHSKVNRERPSISFFGLFSAADRIDYLLMFLGSVGSCIHGAALPV
FFIFFGRMIDSLGNLAVDPHKMSSQVSRHALYLVYLGLVVFASAWIGVAFWMQTGERQTA
RLRLHYLQSVLKKDMNFFDTEAGDSNIIFHISSDAILVQDAIGDKTGHAMRYLSQFIVGF
AIGFASVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYAEAGKVADEVISQIRTV
YSFVGEDRAIEAYSRSLKNALKLGKKSGIAKGIGVGFTYGLLFCAWAMLLWYASVLVRHR
ITSGAKAFTMIINVIFSGFALGQAAPNLAAIAKGRAAASNIISMIETGSNTSKRLKEGSE
LPKVDGKIEFCNVCFAYPSRPSKVLENLSFTVSAGKTFAVVGPSGSGKSTIISMVQRFYD
PDSGKVLLDGHDLKILRLKWLREQMGLVSQEPALFASTIADNILLGKEDASMDEIIQAAK
AANAHSFIQQLPDGYYTQVGEAGTQLSGGQKQRIAIARAVVRNPTILLLDEATSALDTES
EFIVQQALNKIMSNRTTIIVAHRLSTIRDVDTIIVLKNGQVAESGSHLDLISKGGDYATL
VSLQVAEPLTHSNSIGCSEASRNFSFREVPHSQNNQQDFKSISIREPQSNDDSIPSQNHS
PTLSILELIKLNAPEWPCALLGSVGAILAGMEAPLFALGITHVLTAFYSHDASEMRHEIR
RVALIFVGLGVVTIPIYLLQHYFYTLMGERLTTRVRLSMFSAMLSNEIGWFDLEENNTGS
LTSALSADATLVRSALSDRLSTIVQNVALTVTACVIAFTLSWRIAAVVVASLPLLVGASI
AEQLFLKGFGGDYHAYSRATTVAREALTNIRTVAAFGAEERISIRFASELSKPNKQALLR
GHISGFGYGLTQLFAFGSYALGLWYASVLITHKDSNFGHIMKSFMVLIITALAIAETLAL
TPDIVKGSQALGSVFSVLHRRTAIDPNNLASKVVTDIKGDIEFRNVSFKYPARPDITIFE
LLNLKVPAGKSLAVVGPSGSGKSTIIALILRFYDPISGAILIDGCDIKTMNLKSLRLKIG
LVQQEPALFSTTIYENIKYGNENASEVEIMKASKAANAHGFISRMPEGYQTHVGDRGLQL
SGGQKQRVAIARAILKDPSILLLDEATSALDTASEKLVQEALDKLMERRTTILVAHRLST
IRDADSIAVLQHGRVAEFGSHKQLMGKPGSIYKQLVSLQQEERIQS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatggagcttgcttctgatcagatatcagacgagaattcacattcaaaagtt
aatcgagaaaggccaagtatttcgttctttggtttattttctgctgctgatagaattgat
tatctcttgatgttcttgggaagtgtgggatcatgtatccatggcgctgcccttcctgta
ttctttattttttttggtcgtatgattgattctctgggaaatttagctgtggatcctcac
aaaatgtcttcacaggtttccaggcatgcgttgtatttagtgtatctggggcttgtcgtt
tttgcatcagcttggatcggtgttgcgttttggatgcaaactggggagaggcagacagct
cgtttgcgactccattaccttcaatctgttttaaaaaaggacatgaattttttcgacaca
gaagcaggagattctaacatcatatttcacatttccagtgatgcaatattagtgcaagat
gcaataggtgataagacaggccatgccatgcgctacctttctcaattcattgttggattt
gctattggatttgcatctgtgtggcaacttacactcctcaccttggctgtggttccattg
atagccattgctggaggagcttacactataatcatgtctaccttatcagaaaaaggtgag
gcagcttatgctgaagctgggaaggttgcagatgaggttatttcgcaaatccggactgta
tattcatttgtaggagaggatagagcaatagaagcatactcaagatcattgaagaatgca
cttaaattggggaagaaaagtgggattgcaaaaggaattggtgttggatttacgtatgga
ctattgttttgtgcctgggcgatgctgctgtggtatgctagtgtacttgtaaggcatcgc
atcacaagtggggcaaaagcattcacaatgataatcaatgtcatttttagtggatttgct
cttggtcaagctgctccaaatcttgctgctattgccaaaggtcgggctgctgcttccaat
atcattagcatgattgaaacaggctctaacacttctaaaaggttaaaagaaggatcagaa
ttgcctaaagtagatgggaaaattgaattttgcaatgtttgttttgcttatccctcgaga
cctagtaaagtccttgaaaatcttagctttacagtaagtgctggaaagacctttgcagtt
gtcggtcccagtggctcagggaagagcactattatatctatggttcaacgtttctatgat
cccgattcaggtaaagtactattggatggacatgatcttaagattcttcggttgaaatgg
ctgagagaacagatgggattggtgagccaggaacctgcattatttgcctcaaccatagct
gataatattctgcttggtaaagaagatgcaagcatggatgagattattcaagctgccaaa
gcagctaatgcacattcttttatccagcaattacctgatggctattatactcaggtgggg
gaggcaggaactcagctttctggtggacagaagcaaagaatcgctattgcaagggcagtg
gtgagaaacccaacgatattacttttagatgaggctactagtgctctggatacagaatca
gaattcattgttcagcaggccctgaataaaatcatgtcaaataggactacaatcattgtt
gcacaccgtctatccaccattcgggatgttgataccatcattgtcttgaagaatggtcag
gttgctgagagtggaagccatttggacctgatatctaagggaggcgactatgcgacgctt
gtgagtttgcaagttgcagaacctctaacacattcaaattcaataggttgttctgaagct
tctaggaattttagctttcgagaagtaccccacagccaaaacaaccagcaggattttaag
tcaatctcaataagagagccgcagtcaaatgatgacagtatcccctcacaaaatcattct
cccaccctatcgattttggaactaataaaactaaatgcaccagaatggccctgtgcgctg
cttgggtcagtgggtgcaattttggctggcatggaagctcctctgtttgccctgggtatc
acacatgtgctgacagcattttattcgcatgatgcatctgaaatgagacatgagattcga
cgggtagcacttatttttgttggattgggtgttgttaccattcctatatatcttttgcaa
cactacttttacaccttaatgggagagcgtctcaccactcgcgttcgcttatcaatgttc
tcagctatgctttccaacgagattggctggtttgacttagaagagaataacactggctca
ttaacatcagctttatcagctgatgcaaccttagtacgtagtgctctttcagaccgactc
tcaacaattgtgcaaaatgtagcgcttacggtaactgcgtgtgttattgccttcacattg
agttggcgcatagcagctgtagttgttgcatccttacctctgctcgtgggagcttccata
gctgagcaactatttctcaaggggtttggaggagactaccatgcttactctagagcaact
acagtggcacgtgaagcactcactaatattcgtactgttgctgcatttggggctgaagaa
agaatatctattcggtttgcctctgaacttagcaaaccaaacaagcaagcacttttaagg
gggcatatttctggttttggctatggccttacccagctatttgcttttggttcctatgcg
cttggcctttggtatgcatcggtcctaatcacacacaaagattccaattttggacacatc
atgaagtccttcatggttttgataattactgcactggctatagcagaaacacttgctctt
acaccagacattgtgaagggttcacaagcacttggatcagttttcagtgttctccacagg
agaacagctatagaccctaacaatctcgcatcaaaggtagtaactgatatcaaaggggat
atagaattcagaaatgtgagtttcaagtaccctgccaggccagatatcaccatttttgag
cttttaaatctcaaagttcctgcaggcaaaagtctggctgtggtaggcccaagtggttcg
gggaagagcactataattgcgctgatactgaggttctatgaccccatttctggggcaatc
ctgattgacggatgtgatattaaaaccatgaatttgaaatcgttgaggttaaaaataggt
ctggtccagcaggagccagcgctgttctccacaactatttatgaaaacatcaagtatgga
aatgaaaatgcctcagaagttgaaataatgaaagcatccaaagcagcaaatgcccatgga
ttcatcagcagaatgcccgaagggtaccagactcatgtgggggataggggactgcaatta
tctggggggcagaaacagagagtggcaattgctagggcaattctgaaggacccttccatt
cttctattggatgaagctactagcgcattggatacagcatcggagaagctggttcaagag
gctctggataagcttatggaaagacggacgacaattttggtagcccacagattgtcgacc
attcgcgatgcagatagtattgctgtgctacaacatgggagagtggctgaatttggcagc
cataagcagctcatgggaaaacctggtagtatttataagcaattagttagcctgcaacaa
gaagagaggatacagtcataa
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integrated database retrieval system
