Manihot esculenta (cassava): 110616262
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Entry
110616262 CDS
T05761
Name
(RefSeq) SWR1-complex protein 4 isoform X1
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110616262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110616262
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
110616262
NuA4 complex
110616262
Chromatin remodeling factors
SRCAP complex
110616262
SWR1 complex
110616262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
110616262
NCBI-ProteinID:
XP_021614323
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Position
5:complement(792853..798861)
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AA seq
449 aa
AA seq
DB search
MDAKDILGLPKTPLPITQEKKSQPKKDSQRKPDGISREVYALTGGLAPLMPSIDTTQLKR
RPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVNGVSPTGDYSFAKYNKSVDIVRYTDEE
YEKHLTDPMWTKKETDQLFDLCERFDLRFIIIADRFPSSRTVEELKDRYYSVSRAILLAR
APSPGDVSAHPLIKEPYNVSQEVDRKRALSMVLSQTKQQERKDAEVLAEAKRITESRMAA
RGVEESTLHVAPNAGPEIAETANVDGTVSPSSNVQLASAAVAPSTSVTAENASTLASLRM
LRVYLRTYALEQMVQAASSTAGLRTIKRVEQILQDLGVNLKPRVPTKAVCAEHLELRKEI
LTLLNLQKQLQYKEAEGSSFRDGSYTEMPGTPKRSHRDQDGIFIPDSMSFGGERAGRRDQ
KRKGPGRLSDAPASPAAHKRPRKLKASDL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaaggacattctaggattgcccaaaactcctttgccaataacgcaagaaaag
aaatcccaacccaagaaggactcccagagaaaacccgatggcatttcccgcgaggtttat
gcacttactggaggtttggcacctcttatgccgtcaattgatactactcaattgaaacga
cgacccccatcagacgagaagatcacatggcagtggcttccttttacaaattccgctcgt
aaagataatcttcagctttaccactgggtcagagttgtaaatggtgtttcaccaacaggc
gactattcctttgctaagtataacaagtctgttgatattgtcaggtatacagatgaagag
tatgagaagcacttgactgatcctatgtggaccaagaaagagacggatcaattgtttgac
ttgtgtgagagatttgatcttcgcttcattatcatagctgacagattcccgtcatcacgg
actgtggaagaattgaaggatcgatattatagtgtttctcgagcaatactactagctaga
gctccatctccgggtgatgtatcagcacatcctcttattaaggaaccatacaatgtttcg
caagaggtcgatcgtaaacgtgcactatctatggtcctttcacaaacaaaacagcaagag
cgaaaagatgccgaggttcttgctgaagcaaaaagaataactgagtcacgcatggctgca
aggggtgttgaagaatctactttgcatgtagcaccaaatgctggtccagaaattgctgaa
actgctaatgttgatggtactgtttcgccttcatccaatgttcagcttgcttctgcagca
gttgctccctcaacttctgtaacagcagaaaatgcttccactctagcttctctgcgcatg
cttcgtgtgtacttgagaacatatgcacttgagcaaatggtacaagctgcaagttcgact
gcagggcttcgaacaatcaagcgagttgagcaaatattacaagatcttggggttaatcta
aaaccaagggtaccaaccaaagctgtttgtgcggagcaccttgaattaagaaaagaaata
cttactctgctcaatcttcagaaacagttacaatataaggaggcagaaggttcatctttt
cgtgatggttcatatactgaaatgccaggcacacccaagcgttctcaccgtgatcaggac
ggaatatttattccagattcgatgagttttggaggggaaagggctggcagaagggatcag
aaacgcaagggacctggacggttatcagatgctccagcttcaccagcagctcataaaagg
cctagaaaattgaaagcttcggatctatga
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