Manihot esculenta (cassava): 110620855
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Entry
110620855 CDS
T05761
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
Organism
mesc
Manihot esculenta (cassava)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
DEAD
Viral_helicase1
Helicase_RecD
SMUBP-2_HCS1_1B
UvrD-helicase
ResIII
PIF1
UvrD_C_2
ATPase
Flavi_DEAD
SLFN-g3_helicase
T2SSE
nSTAND3
AAA_16
ATPase_2
AAA_22
DAP3
TsaE
cobW
MeaB
NACHT
AAA_10
PhoH
Motif
Other DBs
NCBI-GeneID:
110620855
NCBI-ProteinID:
XP_021620476
LinkDB
All DBs
Position
8:39440641..39446230
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AA seq
981 aa
AA seq
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MEASLVLKQIPSCLSLPWLPRQLPTSKIFSFSSSFKSHLLFLNPKCLSPSTSQIDHQFIW
NSSNEATKPRTTSKKKKFNNKKNIGVPISNTNKSTAASRNPDVGKVVVPEEREKKVKMKV
NVRALNQNGDPLGRRDLGKSVVKWISQGMRAMATDFASAETQGEFSELRQRMGLEAGLTF
VIQAQPYINAVPIPLGLEALCLKACTHYPTLFDHFQRELRDVLQELQRKGLIQNWQQTES
WKLLKELANSVQHRAVARKVSQARPLQGVLGMDLEKAKAIQGRIDEFTKKMSELLRIERD
AELEFTQEELNAVPTRDESSDASKPIEFLVSHGQAQQELCDTICNLYADSTSTGLGGMHL
VVFRVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCIQGFVNNLGEDGCSISVALESRH
GDPTFSKLFGKSVRIDRIYGLADALTYERNCEALMLLQKNGLQKKNPSIAVVATLFGDKR
DVTWLEENHLADWHEADMDGSLESTMFDDSQQKAIARGLNKKRPLLIIQGPPGTGKSGLL
KEIIVRAVHQGERVLVTAPTNAAVDNMVEKLSNIGLDIVRVGNPARISSTVASKSLSEIV
NSKLATFRMEFERKKSDLRKDLRHCLKDDSLAAGIRQLLKQLGKTLKKKEKETMKEVLSS
AQVVLATNTGAAEPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGRRCILAGDQCQLAPV
ILSRKALEGGLGVSLLERAATLHEGVLATKLTTQYRMNDAIASWASKEMYGGLLKSSSKV
ASHLLVDSAFVKPTWITQCPLLLLDTRMTYGSLSVGCEEHLDPAGTGSFYNEGEAEIVVE
HVFSLIYSGVRPTSIAVQSPYVAQVQLLRERLDELPEAAGIEVATIDSFQGREADAVIIS
MVRSNTLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYFGRVKH
AEPGSFGGSGLGMDPMLPSIS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagcttggtgttgaagcagataccaagctgcttgagtcttccttggcttccc
cgtcaattacccacttccaaaattttctctttctcttcctcgttcaagtcccacttgctg
tttctcaatcccaaatgcttgtctccctctacatctcagattgatcaccaatttatttgg
aatagcagcaatgaggcaaccaagcccagaactaccagcaagaagaaaaaattcaataac
aagaaaaatattggcgtccccatatcaaataccaacaaatctactgctgctagtagaaat
cctgacgttggaaaggttgtagtcccagaagagcgtgagaagaaggtcaagatgaaggta
aatgttcgagctttgaatcagaacggggatcctctggggcggagggatcttgggaagagc
gtagtgaaatggattagccaaggaatgagagcaatggccacggattttgcttccgccgag
acgcagggggagttctcggagcttaggcagaggatggggctggaggccggcttgactttt
gtgattcaggcgcagccttatattaatgctgttcctattcctttgggtttagaagccctt
tgtttaaaggcctgtactcactatcccactctgtttgatcacttccagagggagttgcgt
gatgttcttcaagagcttcagcgtaaagggttgatccaaaattggcaacagactgagtct
tggaagttgctcaaggagctcgccaattcagttcagcatagagcagtggcaaggaaagtg
tcgcaagcaaggcctttgcagggagttttggggatggacttggagaaggctaaagcaata
cagggaaggattgacgagtttaccaagaaaatgtcagaattactccgtattgaaagggat
gctgaattggaattcactcaggaggagttgaatgctgttcctacacgcgatgaaagttct
gatgcatctaaaccgattgagttcttggttagccatggccaggctcagcaagagctctgt
gacacaatctgcaacttgtatgcagatagtacatctacaggattgggaggaatgcaccta
gtagtgttcagggttgaaggaaatcaccgactgcctcctactaccctttcacctggagat
atggtttgtgtgaggatttgtgatagcaggggtgcaggtgcaacctcttgcattcagggt
tttgtgaacaaccttggggaggatggctgtagcatcagtgttgctttagaatctcgtcat
ggtgatcccaccttttctaagcttttcggcaaaagtgttcgtattgatcgtatctatgga
ttagcagatgcacttacatatgagcgtaattgtgaggccctgatgctgcttcagaagaat
ggtctgcagaagaaaaatccctcaattgctgttgtggctacattatttggcgacaagcgg
gatgttacatggttggaggagaatcatttggcagactggcatgaagcagatatggatgga
tctcttgaaagtacaatgtttgatgattcacagcagaaggccattgccaggggattgaac
aagaagcgaccattattgataatccaagggcctcctggtactggaaagtcaggtttgctc
aaggaaattattgtacgtgctgtccaccaaggtgaaagggtgcttgtgactgcacctaca
aatgcagctgttgacaatatggttgaaaagctttcaaatatagggttagacattgtgcgg
gttggtaatccagcacgtatttcttcaactgtagcatcaaagtcattgagtgaaatagtg
aattctaagcttgcaacttttcggatggagtttgaaaggaaaaaatctgatctgagaaag
gacctgaggcattgtttaaaggatgattctttagctgctggtattcgtcagcttttaaaa
cagcttgggaagacactgaagaagaaggagaaggagactatgaaggaggtgctatcaagt
gcacaggtagtgcttgcaaccaacactggagctgctgaaccacttattcgaaggctggat
actttcgacctggttgttatagatgaagcagggcaggcaatagaaccctcttgctggatc
ccaatattgcagggtagacgctgtattcttgctggggatcaatgccagcttgctcctgtt
attctatcaagaaaagccttggagggtggccttggtgtatctctacttgaaagagctgcg
actctgcatgaaggggtccttgcgaccaagttaacgacacaatatcgtatgaatgatgca
atagccagttgggcctccaaggagatgtatggtggattgttgaagtcttcttcaaaagtt
gcttcgcatcttcttgtggattctgcatttgttaagcctacgtggataactcaatgcccc
ctgctgttacttgacacaagaatgacatatggaagtttgtcagtaggttgcgaagagcat
ttagacccagctggaacgggttcattttataatgagggggaagctgaaattgttgtggaa
catgtattttccttaatttattcaggtgttagaccaacaagtattgctgttcaatcacct
tatgttgctcaagtacaactcttgagggaaaggctggatgaacttccagaggcggctggc
attgaggttgcaaccattgatagcttccagggtcgggaggctgatgcagtaatcatatca
atggtccgttcaaacaccttaggagctgttggattcctcggggacagcaggcgaatgaat
gttgccatcacaagagcacgaaaacatgtagcagtcgtctgtgatagctcaacaatatgc
cacaacactttcctggccaggctcttgcgccacatccgctattttggtagggtgaagcat
gctgagcctggtagttttgggggatctggacttggtatggatccaatgttaccatcaatt
agttga
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