Manihot esculenta (cassava): 110621089
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Entry
110621089 CDS
T05761
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110621089
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110621089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_2
ResIII
UTP20_C
RIX1
Motif
Other DBs
NCBI-GeneID:
110621089
NCBI-ProteinID:
XP_021620838
LinkDB
All DBs
Position
8:39268744..39291526
Genome browser
AA seq
2045 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWD
TRVAAAHAIGAIAQNVKHTSLAELFGCIETKISEAGISGVVEDLVAWPDFHSKIISSGSF
RSFDINKVLEFGALLASGGQEYDIANDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVND
VIRDEDLVVQKLNPQGNGLEHRFYMPPSAHNIQRLVASMVPNVVSKRPSARELNLLKRKA
KINSKDQAKGWTEEADTEVSFAQSTTPKASIQDSFNSNKVDADEDNFEHDGDGRWPFRGF
VEQIILDMFDPIWEVRHGSVMALREILTHHGGSAGVLMPDLSLDGAVDDLKDLDYSSTVK
REREIDLNMQVSAEELEPHLKRPKLEEGTSLSTGTMSSTACGGNFDITVKVEDGGWNIPA
GQVNGQVDVNAVKMEECDNYTDGISCSSKGAAVVMEPKGHCEDKGSIVKSDILNNLAENS
DLTNFVKLARHSWMKNSEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGAAF
KYMHRSLILETLNILLQMQCRPEWEIRHGSLLGIKYLVAVRQEMLPDLLGYVLPACKAGL
EDPDDDVRSVAADALIPTAGAIVSLKGRALHSIIMLLWDILLDLDDLSPSTSSVMNLLAE
IYSQEDMIPKMISKEKQELDLNEVLNVDDAGEGRDLQENPYMLSTLAPRLWPFMRHTITS
VRYSAIRTLERLLEASYKRNISEPSGTSFWPSFILGDTLRIVFQNLLLESNEEILLCSER
VWRLLVQCPVEDLEAAANSYMSSWMELATTPFGSPLDSAKMFWPVAPPRKSHFKAAAKMR
AVKLENESCKIIGMDSGKETIPQERNGDASASTVKIIVGADGEMSVTNTRVITASALGIF
ASKLREGSFPYVTDALWNALASLSGVQRQVASMVLISWFKEIKSNDLSEKHGVLPVFPNH
IKSWLLDLLSGTDPTFPTKDSVLPYSELSRTYAKMRSEASQLLHAIESSGMFENILSSIK
VDVESLSTDKAINLASKLPPLCNDSTGNESIGRNIVDDIESSKHRLLTTASYLKCVQSNL
HITVSALVAAAVVWMSELPARLNPIILPLMASIKREQEEILQHKAAEALAELICRCVARK
PSPNDKLVKNICSLTCADPLETPQVGVISSMEIIDDQDFLSFGNNMGKQKSKVHTLAGGE
DRSRVEGFISRRGAELALKHLCEKFGACLFDKLPKLWDCLTEVLMPGSPADEQLIAQSIE
SVKDPQVLVNNIQVVRSVAPLLDETLKPKLLTLLPCIFKCVRHSHIAVRLAASRCITSMA
KSMITNVMAAIVENAIPMLGDATSIHARQGAGMLVSFLVQGLGVDLVPYAPLLVVPLLRC
MSDIDHSVRQSVTRSFAALVPLLPLARGLPSPSGLNEGLTRNAEDAQFLEQLLDNSHIDD
YKLFTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRSS
HEDIQPSLIVCPSTLVGHWAFEIEKYIDVSVICTLQYAGSTQERTSLREQFNKHNVIITS
YDVVRKDIDFLGHFLWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNVMD
LWSLFDFLMPGFLGTERQFQATYGKPLLAARDAKCSAKDAEAGVLAMEALHKQVMPFLLR
RTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSPARQEISSMVKLGESTHSEGHSAS
PKASSHVFQALQYLLKLCSHPLLVVGEKMPEILASQLSELFPASSDIISELHKLHHSPKL
VALQEILEECGIGIDTSSSENAMNVGQHRVLIFAQHKALLDIIERDLFHSHMKNVTYLRL
DGSVEPDKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDLQAM
DRAHRLGQKKVVNVHRLIMRGTLEEKVMNLQKFKVSVANAVINAENASLKTMNTDQLLDL
FASAETNTKGTMTSKHADGKTDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLTQFL
AKLNG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcagtcctcgcgtctcaatcggttactcactctattagacactggttcg
actcaagcaacaagatttactgccgcaaggcaaattggagatattgccaaatcacatcct
caggatttgagttctcttttaaagaaggtttctcaatatctccgtagtaaaaactgggat
acaagagttgctgctgcccatgcgattggggctattgctcagaatgttaagcacacatct
ttggctgaattatttggttgcatagaaacaaagatatctgaggctggcatttcaggtgtt
gttgaagatttggttgcttggcctgattttcattctaagatcatatcaagtggttcattt
agaagttttgatatcaacaaagtgttggagtttggtgctctattggcatctggggggcag
gagtatgatattgcaaatgataattccaagaatccaagggagcgattggctcgtcaaaaa
cagaacttgcgacgtcgtctcggtttggatgtttgtgagcagtttatggatgtcaatgat
gtaattagagatgaagatcttgttgtccaaaaattaaacccccaaggaaatggattggag
cataggttttatatgcctccgtctgcacataacatccagcgacttgttgcaagtatggtt
cctaatgttgtatctaaaaggccaagtgcaagggaactgaatctcttaaagcgaaaagca
aaaataaattcgaaagaccaagcaaaaggttggactgaggaggctgatacagaggtgtca
tttgctcagagtacaactccaaaggcctcaattcaagattcatttaactctaataaggta
gatgctgatgaagacaattttgagcatgatggagatgggaggtggcctttccgtggtttt
gttgaacaaattatccttgatatgtttgaccccatttgggaggttcgccatggtagtgtt
atggcattgagggaaattttaacccatcatggtggttctgctggggtgcttatgcctgac
ttgagtttggatggtgccgtagatgatctaaaagatctggattattcaagcacggtgaaa
agagagagagaaattgatttgaatatgcaagtttcggctgaggagttggaaccacatctg
aaaaggccaaagttagaagaaggaacatctctatcaactggtaccatgtcctctactgct
tgtggtggtaactttgacatcactgtcaaggttgaagatggtggatggaatatccctgca
ggacaagttaatggtcaagttgatgttaatgctgttaagatggaggaatgtgataattac
actgatgggatatcttgttcatctaaaggtgcagctgttgtaatggagccaaagggtcac
tgtgaagataagggttctattgtgaaatcagatatactgaacaaccttgcagaaaatagt
gacctgacgaactttgttaaacttgctaggcattcatggatgaaaaacagtgaatttctt
caagattgtgcaattcgtttcttatgcattttatcattagaccgttttggagattatgtg
tctgaccaggttgttgctccagtaagggaaacttgtgcacaagcactgggggctgcattt
aagtacatgcatcgctcattaattcttgaaacgctgaatattctgcttcaaatgcagtgt
agaccagaatgggaaattcgtcatggaagccttttgggtatcaaatatttggttgcagtt
cgtcaggagatgttgcctgatttgcttggctatgttttgccagcttgtaaagctgggctt
gaggatcctgatgatgatgttcggtccgtcgctgcagatgctttaataccaacagctggt
gctattgtttctctgaagggtcgagctttgcattccattattatgctactttgggatata
ttgcttgatttagatgatctaagtccatccactagcagtgtgatgaatcttttggcagaa
atttattctcaggaggatatgattcctaagatgatatcaaaagagaaacaagagttagat
ctgaatgaagtacttaacgttgatgatgctggagaaggaagagatctgcaggagaatcct
tacatgttatcaacgttggcgccgcgattatggccatttatgaggcacactatcacatcg
gttcgatattcagccattcgaaccctggagcgattacttgaagccagttataaaaggaac
atctctgagccatctggtacttcattttggccctcttttattttgggtgatacccttcgg
atagtttttcagaacctgctgcttgaatccaatgaagaaattttgctatgttcagagagg
gtttggaggctacttgttcagtgtccagtggaggacttggaagctgctgcaaattcatac
atgtcttcttggatggaacttgcaactacaccatttggttcaccattggattctgcaaag
atgttttggcctgtggctccacctcgaaagtctcattttaaagcagcagctaaaatgaga
gctgtgaaacttgaaaatgagtcttgtaaaatcatcggcatggattccgggaaggaaact
attccccaggaaagaaacggagatgcttctgccagcacagttaagatcattgttggtgct
gatggtgagatgtcagtcactaatactcgagtgattacagcatcagcattgggaattttt
gcttctaagttgcgtgaaggatcttttccatatgtaacagatgcactgtggaatgccctt
gcctctttatctggagtccagcggcaggtggcatccatggttcttatttcatggttcaaa
gagatcaagagcaatgacctgtctgaaaaacacggagttctacctgtttttcctaaccat
atcaaaagttggttgttggatttattatcaggtactgaccctacatttcctacaaaagat
tctgttcttccatattctgagctctcaaggacatatgcgaagatgcgcagtgaggccagt
cagttattacatgccattgagtcctctggcatgtttgagaatatattatcatctattaaa
gtagacgtggaaagcttgagcactgataaggcaatcaatcttgcttcaaagttgcctcca
ttatgtaatgacagtactgggaatgaatctataggacgaaacattgtggatgatattgaa
tcatcaaagcacagacttttaacaactgcaagctatttgaagtgtgtacagagtaacttg
catattactgtctctgctttagttgctgctgcagttgtctggatgtcagaacttcctgca
cgacttaatccaattattttgcctctgatggcctcaatcaagagagagcaggaggaaata
ttgcaacacaaggctgctgaggcacttgctgagctaatttgtcgttgtgttgcacgtaag
cctagtccgaatgataagttagtaaagaatatttgtagcctgacatgtgctgatccctta
gagacgcctcaagttggagtcatcagttctatggagattattgatgatcaagattttctt
tcctttgggaataatatgggaaaacaaaagtcaaaggttcataccctagctggtggcgaa
gacaggtcaagagttgagggcttcattagcagacggggtgctgaacttgcattgaaacat
ttgtgtgagaagtttggcgcttgcttatttgacaaacttccaaaactatgggattgcctc
actgaagttctgatgcctggaagtcctgcagatgaacaactaattgcacaaagtattgag
tctgtgaaagatcctcaagtccttgtaaataatattcaggtagtacgttctgttgctcca
ttgttggatgagacattgaagcctaagttgctcacacttcttccatgcattttcaagtgt
gttcgccattctcatattgcagttagattggctgcttcaaggtgtatcacttcaatggcc
aagtcaatgataacaaatgtcatggctgctatagttgaaaatgctattccaatgttaggg
gatgctacttctattcacgccagacaaggtgctggcatgcttgttagttttcttgttcag
ggattgggtgtagatttggtaccatatgctcctttattagttgttcctcttctacggtgc
atgagtgatattgatcactctgttagacagagtgtgacacgtagtttcgctgctcttgtt
cctcttcttccattagcacggggtctaccctctcctagcggattgaatgagggtctaaca
aggaatgctgaagatgctcagtttttggagcaactacttgacaattcacatattgatgat
tacaagcttttcacagaactgaaggtgacattgagaagatatcaacaagaggggattaac
tggttggctttcttaaaacgtttcaaacttcatggtattctctgtgatgatatgggactt
ggtaagacattacaggcatcagcaattgtggcatctgacattgcagagcgccgtagtagc
catgaggatattcaaccatcattgattgtttgcccatcaacacttgttggacactgggcc
tttgagatagagaagtatattgatgtttctgtaatatgcacgctacaatatgctggctcc
actcaagagcgtacatctcttagagaacaattcaataagcataatgttatcattacatcg
tatgatgtggttcgcaaagacattgatttccttgggcattttctgtggaattattgtatt
ttggatgaagggcatataatcaagaatgcgaaatctaaaattacagctgcagtgaaacag
ttgaaagcccaacatcgcctaatacttagtggaacacctattcagaataacgtaatggat
ctatggtctctctttgacttcctaatgccagggtttcttgggacagagagacaattccaa
gccacttatgggaaacctttgttggctgctagagatgctaaatgttctgccaaggatgct
gaagccggggtgcttgccatggaagccttgcacaagcaggtgatgccctttctccttcgg
cgaacaaaagacgaagttttgtctgacttgccagagaaaatcattcaggacagatattgc
gatttgagccctgtccagttaaaattatatgaacagttttctggttcacctgctaggcaa
gagatttcaagtatggtaaaactgggtgagtcaacacatagtgaaggacatagtgcttca
ccaaaagcatcttcacatgttttccaggcacttcaatatttgctaaaactttgcagtcat
ccattgcttgttgttggtgaaaagatgcctgaaatacttgcatcccagttatctgaactc
tttcctgcaagttctgacataatctcagaattacataagttgcaccattcaccaaaatta
gttgctctccaagagattctggaagagtgtggcataggtatagatacttcgagttctgag
aatgctatgaatgttgggcagcacagagttttgatattcgctcaacacaaggccctgctt
gacattattgaaagagacttgtttcactcccatatgaagaatgtcacatacttgcggctg
gatggatcggttgaaccagacaaacgttttgacattgtaaaggcttttaattcagaccct
actattgatgccttattgcttacaacacatgttgggggccttggtttgaatctgacatct
gctgacacccttgttttcatggagcatgattggaatccaatgcgagatcttcaggctatg
gacagggcacacagattaggtcaaaagaaagttgtgaatgttcatcgtctcatcatgcgt
ggcacattagaagagaaagttatgaatctccagaagtttaaagtatctgttgctaatgct
gttattaatgcagagaatgccagcctgaaaacaatgaatacagaccagttacttgattta
tttgcatcagctgaaaccaatacaaagggaactatgacctcaaagcatgcagatggtaag
accgacggagaccctaaattaatgggcactgggaagggcttaaaagctatccttggggga
ctggaagagctgtgggatcaatcacagtacactgaagagtacaatctgacgcagttctta
gccaagctcaacgggtga
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