Manihot esculenta (cassava): 110622505
Help
Entry
110622505 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A isoform X1
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110622505
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110622505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110622505
NCBI-ProteinID:
XP_021622708
LinkDB
All DBs
Position
9:complement(32319095..32329793)
Genome browser
AA seq
1335 aa
AA seq
DB search
MELEIRREREMEETILETIKICHHRQEAPLPWAMEVGKCILSLGMSLPSPELGHVLVSYI
CFHNNHPSLWKFLQQALSSRLLSPIHVLSLLSARVIPNRRSQPEAYRLYLELLGRYAFSL
DSIGEEACKQKIIKSVDAALQLSHTYRVQVQELGQVLVLFFFSIVVGLIDSTFNDWGLLM
KTPDGPSGPFGSADNKDMDVDARGNYNVGRYEHLELLRKTNSLFAIEVLVKLTESRKAMV
LLRIVYLNMPEIFNGLLQRLLFYKANKLASSNAESANQLLERLLANIQRVYDSEYQLNRH
QIIRMLIDIKPCKHMSYCNSESGQSSRWVSLDIYMENAMDGKQLHIRPSVAILTEAIKTL
QVLNRASWQETFLALWLSALRLVQRERDPVEGPIPHLESRLCILLTIVPLAIANILEDEA
RFSSSSVQGAGKSGGMESTLEHQVEGNGQTSRKHELILSLQVLGDFSGLLCPPSSVIGAA
NSAALVAASFISNSNNTKSGLVDANRTDPSINAGGNMRHLIVEACITRNLIDASAYYWPG
YVSTSVISLVSDLPPVQKSPWLTFMEGAPLDNSLVNLLLTTPAPSLAEIEKLYHIALDGS
AEEKSAAAKILCGASLTRGWNIQEHVVCHVVKLLSPPIPSTHNGQRSHLVDYVPMLNAIL
FGVSTIDNVQMLSLHGVIPEVAASLMPLCEVYGSLVPTSTNISNSSDEPSIYMVFSNAFL
FLLRLWKFYRPPLDQWLSGGGAFGGGLTLEYLLLLRNSRIASHNSAASNEINSDSVQFQS
TSDKPVYIDFYPKLRAWYCQNKSCVASTLSGLCNGNPVHQVANKILNMIYSKMTKTGTSS
GNSSTLSSNSLCGSTSSGGEDPQQRPMLPAWEVLEAIPFVLEAVLTACAHGKLSSRDLTT
GLRDLIDFFPASIGAIISYFAAEITRGTWKPVPMNGTDWPSPAAVLPYIEAEMKEILSVA
GVDFPSCSSAAGLSPVMLPLPMAALVSLTITFKLNKGLDHIHAVVGPALENCASGCPWPS
VPIIGSLWSQKVRRWHDYIVVSCARSVFRQNKEAVAQLLRSCFSSFLGSVNASTSLLTYQ
SSVCGLLGSTIGVPGVIGSLAPGFLYLRSCQTIQDIQYVNGLITSLVGEHARESTARWPS
SKSSRLKSSQASLSLAATKAREAAMLGASLVCVSGGMNLVQELYMETIPTWLLSSRDAKH
GGVSVVSRIVEGYAMAYLLIFTGSYAWGVGARSPAWALSRRAHIVGAHMDFLAGVLEGNI
SLGCHPATWKAYVSCLVHLVVSFTPAWIQEVRVETLKKLASGLRGWHECELALSLLERGG
VAAIGSVVELVNVIN
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagatcaggagagagcgtgaaatggaggaaacaatcttggagacaatcaag
atttgccaccaccgtcaggaagctccgttgccttgggctatggaagtcggaaaatgtatt
ctctccttggggatgagcttgccgagcccggagttagggcatgtacttgtttcttatatc
tgttttcataataatcatccttctctatggaagttccttcagcaagctctctcgtctcgc
ctcctctctcccatccatgtcctgtcgctcctctccgccagagttatccctaatcgacgg
tctcaaccagaggcttatagactctatcttgaattgctcggccgatatgcattttctctt
gattcaattggcgaagaggcttgcaaacagaagataataaaatctgttgatgcggctttg
cagctttcccatacttacagagttcaggttcaggagcttggacaagttctggtgctcttc
ttttttagcattgttgttggcttgattgacagcactttcaatgactggggattactaatg
aagaccccagatggaccaagtggaccatttggaagtgctgataataaggatatggatgtt
gatgccaggggaaactataacgttggaagatatgagcatcttgaacttttaaggaaaaca
aattctctttttgccattgaggtgttggtaaaactaacggagagtagaaaagcaatggtt
ctacttcgcattgtttacttgaacatgcctgaaatattcaatggcctcctgcagaggttg
ttgttttacaaggccaataaattggcatcctccaatgcagaatcagctaatcagcttttg
gaaagattattagctaatattcagagagtttatgattctgaataccaattaaaccggcac
cagatcattcgaatgcttattgatattaaaccatgcaagcatatgtcttattgcaattca
gagtccgggcaatcttctcgttgggtatccttagatatatacatggagaatgctatggat
gggaagcaacttcatattagaccatctgttgctatccttacagaagcaattaagacactc
caagtgcttaaccgcgcgagctggcaagaaacttttttagcgctttggctttcagctctt
cggcttgtacaacgagaacgcgaccctgtggaaggtcctattccacatcttgaatctcgt
ctttgtatccttttgactattgtccctttggcaattgctaatattttggaggatgaggcc
aggttttcttcctcttctgttcagggagctggaaaatctggtggcatggagtctacattg
gaacatcaagtggaggggaatggtcaaacttcaaggaaacatgaacttatattgtctctc
caggtccttggagatttctctggtctcttgtgcccaccttcatctgtcattggtgcagct
aatagtgcagctctagtagcagcaagtttcatttccaattccaataacacaaagagtggt
ttagttgatgctaatcgaactgatccttctatcaatgcaggtggaaacatgaggcacctc
attgtagaagcttgcattacaagaaatttaattgatgcatctgcatattattggcctggc
tatgtgtctacttcagttatctcactggtgtcagatttaccaccagttcaaaaatctcct
tggttaacattcatggaaggagcaccattggataattctcttgtaaatttacttcttact
actcctgctccaagtttagcagagatagagaagttgtatcatattgcactagatgggtca
gcggaggagaagtcagcagctgccaagattctttgtggggcatccctaacccgtggatgg
aacattcaggagcatgtggtgtgccatgtggtgaagcttctttctcctcctataccttct
actcacaatggacaaagaagtcacttggttgattatgtgcctatgctgaatgctattctt
tttggagtttcaacaattgataatgtgcagatgctttctctgcatggtgttattcctgaa
gtagctgcttctttaatgcctctttgtgaggtatatgggtcacttgttcctacatcaact
aacatatcaaactcaagtgatgagccctcgatttacatggttttttctaatgcatttctc
tttcttctccgtctatggaaattctatagaccccctcttgaccagtggttgtcaggagga
ggagcatttgggggtgggcttactttggagtaccttttactgttgcgcaatagccgcatt
gcatcacataattctgctgcttcaaatgaaataaacagtgactcagtccagtttcaatca
acatctgataagcctgtatatattgatttttatcccaaattacgagcttggtattgtcag
aacaagtcatgtgtcgcttcaacattgtctggactctgtaatggaaatcctgttcatcag
gttgctaacaaaattttaaacatgatttactcaaaaatgactaaaactgggacttcttcg
gggaattcctcaactttatcaagcaacagtttatgtgggtccacttcaagtggtggagaa
gatcctcagcaaagacccatgcttcctgcttgggaagtgttagaggccatcccttttgtg
cttgaggcagtattaacagcttgtgctcatggaaagctttcatcgcgggacttgacaaca
ggcctgagggacctcattgacttttttcctgcatctattggagctattatcagttatttt
gctgcagaaattactcgaggtacatggaaaccagttccaatgaatggaacagattggcct
agtccagcagctgtccttccatatattgaggctgaaatgaaagaaatactttctgttgca
ggagttgattttccaagctgttcctctgctgcagggctttcacctgtcatgcttccgttg
ccaatggcagctctggtcagtttaaccattactttcaaactcaacaagggccttgatcac
attcatgctgtagttgggccagctttggagaactgtgcatcaggttgcccttggcccagc
gttcctataattggctctctgtggtcccaaaaggtccgtcggtggcatgattacatagtt
gtatcttgtgctcgctctgtgttcaggcaaaataaagaagcagttgctcagcttctaaga
agttgcttctcatcattcttaggatcagttaatgcttccacatctttgttaacctatcag
agcagcgtgtgtggtctactgggtagcactataggggttcctggtgttattggatccttg
gcaccaggttttctttaccttcgctcttgtcagacaatacaggatattcagtatgtcaat
ggtttgattacaagtcttgtaggagaacatgctagggaatcaactgcaagatggccaagc
tcaaagtcctctcgcctgaagtctagccaagcatctttatcccttgctgctacaaaggcg
agggaggcagccatgctgggtgcaagccttgtttgcgtgtcaggtgggatgaatctagtt
caagagctttacatggagactatcccaacctggttgctctcgtccagggatgcgaaacat
ggtggggtgagtgtagtttcccgtatagtggaaggatatgcgatggcatacttgttgatt
ttcacagggtcttatgcatggggcgttggggccagatctccagcatgggcactgtctaga
agggcccatatagtaggggcccacatggactttttggcaggggtattggaaggaaacata
tcacttggctgtcatccagccacttggaaagcttatgtctcttgtttagtacatttagtg
gtgagttttactccagcttggattcaagaagtgagggtggaaactctgaagaaattggcc
agtgggttgagaggatggcatgaatgtgagttagctctctctctgcttgaaaggggtggg
gttgcagccattggatctgtagtcgaactggtcaatgtcattaattga
DBGET
integrated database retrieval system
