Manihot esculenta (cassava): 110622644
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Entry
110622644 CDS
T05761
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110622644
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110622644
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622644
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110622644
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110622644
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110622644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
Malt_amylase_C
SASP
Motif
Other DBs
NCBI-GeneID:
110622644
NCBI-ProteinID:
XP_021622926
LinkDB
All DBs
Position
9:7471268..7495205
Genome browser
AA seq
1114 aa
AA seq
DB search
MTLMTPPPLDQEDEEMLVPHSDLVEGPQPMEVAQVDSASTVDNQAVEDPPSMKFTWTIEN
FSRLNTKKHYSDTFLVGSYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSLA
VVNQIHNKYSIRKDTQHQFNVRESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEAEVAVRK
ILDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIP
LALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESYYDLQLDVKGCRDVYASFDKYVEVERLEGDN
KYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREN
GKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMKR
ALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDNIICNVDEKDIAEHLR
VRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQKQ
TSFSHFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTAHEEAQSVGQLREVSNKAH
NAELKLFLEVEFGLDLRPIAPPEKTKEDILLFFKLYDPAKGELRYVGRLFVKGSGKPMEI
LAKLKQMAVIASDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQLEDGDIICFQKTPLAGE
EDCRYPDVPSFLEYVHNRQIVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQIGLDDP
SKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKNL
KVAFHHATKDEVVIHNIRLPKQSTVGDVINELRTKVELSHPNAELRLLEVFYHKIYKIFP
HNEKIENINDQYWTLRAEEIPEEEKSLGPHDRLIHVYHFTKETAQNQMQVQNFGEPFFLV
IHEGETLAEVKSRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDIVFTRFQRRDVYGAW
EQYLGLEHSDNTPKRSYAVNQNRHTFEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactccacctccgttagatcaagaagacgaggagatgctcgtgccgcat
tcagatttggttgagggtccacagcctatggaagtggctcaagtggattcagctagcact
gtggataatcaagcggtggaggatcctccttccatgaaatttacatggacaattgagaat
ttctctaggttgaacactaagaagcactattctgatacattcctcgttggcagttataaa
tggcgaatactaatttttcccaagggaaacaatgtggaccacttgtctatgtatttggat
gtagcagattctgccacattgccatatggatggagtagatatgcacaattcagtttggct
gtagtcaatcaaattcataacaagtattcaattagaaaagacacacagcatcaattcaat
gtaagagagagtgattggggtttcacatcatttatgcctcttagtgatctttatgatcct
agtagaggataccttgtaaatgatacagttattgtggaagctgaagttgctgttcgtaag
attctggattattggtcatatgactcaaaaaaagagactggatatgtaggattgaagaac
caaggagcaacatgttatatgaactctctcctgcagactctctaccacattccttatttt
agaaaggctgtgtaccacatgccaacaactgagaatgacatgcctacaggaagcattcct
ttggctctgcagagtttattctataagctgcaatataatgacaccagtgttgcaacaaag
gaactgacaaaatcttttggatgggatacatatgattccttcatgcagcatgatgtacaa
gaactcaatagggttctatgtgagaagctagaagataagatgaagggaactgttgtggag
gggacaatacagcagctttttgagggccatcacatgaattatatcgagtgcattaatgta
gattataaatctacaagaaaagagtcatattatgatctccagcttgatgtgaaaggttgc
cgggatgtatatgcttcttttgacaagtatgtagaagttgaaagacttgagggtgataac
aaataccacgctgaagaacatggtctgcaggatgctaagaagggtgtcttgtttattgac
tttcctcctgttcttcaacttcaactgaagaggtttgagtatgattttatgcgagacacc
atggtgaagattaatgaccgctatgagtttcctcttcaacttgaccttgatagagagaat
ggaaaatatctatcgccggaagcagacaggagcgttcgtaacctttacacgcttcacagt
gtcttggtccatagtggaggggtgcatggtggacattattatgctttcatcaggccaacc
ctttctgatcagtggttcaaatttgatgatgaacgggtgactaaggaggatatgaagagg
gcattagaagagcagtatggaggcgaggaagagcttccacagaccaatcctggctttaac
aatgctccctttaagttcacaaaatactcaaatgcatacatgcttgtgtatatacgcgaa
agtgacaaggacaatataatttgtaatgttgatgaaaaagacattgctgaacacctgagg
gttaggttgaaaaaagaacaagaggagaaggaagacaagagaagatataaagcacaagcc
catctctataccattataaaggttgcacgagatgaggatcttaaagagcagattggaagg
gatatttattttgaccttgtggatcatgacaaagtccgtaatttccgtatccagaagcag
acatcatttagtcattttaaggaagaggttgccaaagaatttggtgtaccagtacaactt
cagcgattttggatatgggcaaagcgtcaaaatcatacatatcgtcccaatcgaccacta
actgctcatgaggaagcgcaatcagttggacagctgagggaagtttcaaataaagcacac
aatgcagaattgaagttgttcttggaagtagagtttggactggatttacgtcctattgct
cctcctgaaaaaactaaagaagatattcttcttttcttcaagctttatgatcctgccaaa
ggagaattacgatatgttggtaggctttttgtgaagggttctggaaaaccaatggaaatc
ttggcaaagcttaaacaaatggctgttattgcatctgatgaagagattgaactttatgag
gaaataaagtttgagccttgtgtcatgtgtgaacatcttgataaaaggacctcatttcga
ttaagtcagcttgaagatggagacataatttgctttcagaaaactcctcttgcgggtgaa
gaagattgccgatacccagatgtgccttcatttttggaatatgtgcacaatcggcagata
gttcattttcggtctctcgagaaaccaaaagaggatgatttttgcctagagttgtcaaag
ctacatacttatgatgatgttgtggaaagagtagctcgccaaattggtttagatgatcca
tccaagatcaggttaacatctcacaactgctactcccagcagcctaagccccaaccaatt
aaatatcgaggagtggagcatctgtcagatatgttagttcactataaccagacatctgat
attttatactatgaagttctggatatccctcttccagaattgcaaggtttgaaaaatctg
aaagttgctttccatcatgctactaaagatgaggtggtaattcataatattagattacct
aaacagagcactgtgggggatgtgattaatgaacttagaacaaaggtagagttgtctcac
ccaaatgcagaacttcgtcttcttgaagttttctatcacaagatttacaagatctttcct
cataatgaaaaaattgaaaatataaatgaccagtactggacactgcgtgctgaggagatt
cctgaggaagagaaaagtcttggaccccatgatcgtttgattcatgtttatcactttaca
aaggagacggctcagaatcaaatgcaagtacagaattttggggagccatttttcttggtc
atccatgaaggtgaaactttagctgaagttaaatctcgcatacaaaagaaattgcaggtt
cctgatgaggaatttgctaagtggaaatttgcatttctgtcactaggtcgtccagaatat
ctgcaggattctgacatagtgtttacccgttttcagagaagagatgtttatggtgcttgg
gagcagtaccttgggttagagcattctgacaacacaccaaagaggtcttatgcagtaaac
cagaaccgtcatacatttgagaagccagttaaaatatacaattag
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integrated database retrieval system
