Manihot esculenta (cassava): 110623128
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Entry
110623128 CDS
T05761
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110623128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110623128
04147 Exosome [BR:
mesc04147
]
110623128
04090 CD molecules [BR:
mesc04090
]
110623128
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110623128
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110623128
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110623128
CD molecules [BR:
mesc04090
]
Proteins
110623128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_22
AAA_29
RsgA_GTPase
AAA_30
nSTAND1
AAA_5
DUF815
AAA_15
SbcC_Walker_B
DUF87
PRK
AAA_25
Rad17
ChiC
Motif
Other DBs
NCBI-GeneID:
110623128
NCBI-ProteinID:
XP_021623721
LinkDB
All DBs
Position
9:10830396..10837370
Genome browser
AA seq
1353 aa
AA seq
DB search
MSQESEEIKTIEQWKWSEMQGLELVSPAPPPCSDPFKTNSSSSPPSTSTLTIDSQQLQMD
NINTTPKKDGGGSVSNSGGGGGGEKPGDVATVGFVELFRFADGLDYVLMAIGSVGALVHG
SSLPLFLRFFADLVNSFGSNANDMDKMMQEVLKYAFYFLIVGAAIWASSWAEISCWMWTG
ERQSTRMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFLHYMAT
FVSGFVVGFTAVWQLALVTLAVVPLIAVIAAIHTNTLAKLSGKSQEALSQAGNIVEQTIV
QIRVVLAFVGESRALQGYSSALKVAQRIGYKSGFAKGMGLGATYFVVFCCYALLLWYGGY
LVRHHYTNGGLAISTMFAVMLGGLALGQSAPSMGAFAKAKVAATKIFRMIDHKPAVDRNS
ESGLELDAVTGLVELKNVDFSYPSRPEVRILNNFTLNVPAGKTIALVGSSGSGKSTVVSL
IERFYDPNSGQVLVDGHDIKTLKLRWLRQQIGLVSQEPALFATSIKENILLGRPDADQIE
IEEAARVANAHSFIVKLPEGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATS
ALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELIAKG
ENGVYAKLIRMQEAAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDF
STSDFSLSLDAAYPNYRLEKLPFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCGSLSAF
FAYVLSAVLSVYYNPNHAYMSREIGKYCYLLIGLSSAALIFNTLQHFFWDIVGENLTKRV
REKMLAAVLKNETAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACT
AGFVLQWRLALVLIAVFPLVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVA
AFNSESQIVGLFTTNLQIPLRRCFWKGQIAGSGFGVAQFLLYASYALGLWYASWLVKHGI
SDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRKTEIEPDEPDATAA
PDRLRGEVELKHIDFSYPTRPDVPIFRDLNLRARAGKTLALVGPSGCGKSSVIALVQRFY
EPSSGRVIIDGKDIRKYNLKSLRKHIAMVPQEPCLFAATIYENIAYGHESATEAEIIEAA
TLANAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDEATSALDAE
SERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCY
ARMIQLQRFTHNQVIGMTSGSSSRSKDNGEREA
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagagtctgaagagataaagacgattgagcagtggaaatggtccgaaatgcaa
ggccttgaactcgtgtctcctgctcctcctccttgttctgacccctttaaaaccaactct
tcttcctcccctccttcaacttcaactctaacaattgactcacaacaattacaaatggat
aacattaacactactccaaagaaagatggtggtggtagtgttagtaatagtggtggcggt
ggtggtggagagaagccaggggacgttgctactgttgggttcgtggagctgttcagattc
gctgatgggttggattatgtgttgatggctattgggtctgttggtgcattagttcatggc
tcttcattgcctctctttcttcgcttcttcgctgatcttgttaactcttttgggtctaat
gccaatgacatggataagatgatgcaagaagttctcaagtatgcattttattttctcatt
gttggtgctgcaatctgggcgtcttcctgggcagagatatcatgttggatgtggactgga
gagaggcaatcaaccaggatgaggatcaagtacttagaagcagctctgaaccaggacatt
caatattttgacacagaagttcgcacctccgacgtggttttcgccattaacactgatgca
gtgatggtgcaagatgccattagtgagaagttgggcaatttccttcactatatggcaact
tttgtgtctggatttgtggtgggcttcactgctgtgtggcaattagctctagtcactcta
gcagttgttcctcttattgctgtgattgcagcaatccacacaaacacactagctaagcta
tctgggaaaagccaagaagctttatcacaagcaggaaacattgtagaacagacgatagtt
caaattcgggttgttttggcatttgttggggagtcaagagcattacaaggctattcgtca
gcattgaaagtggctcaaagaatcggttacaagagtggatttgccaagggaatgggatta
ggtgcaacttattttgttgttttttgctgctatgctctgcttctctggtatggaggttat
cttgttagacatcactacaccaatggaggactcgcaatatccaccatgttcgctgtcatg
cttggaggattggctttaggccaatctgcccctagcatgggtgcatttgctaaagcaaaa
gttgctgctacgaaaatttttcgaatgattgatcataagccagctgttgatagaaacagt
gaatctgggttagaattagacgcagttacagggctcgttgagctcaaaaatgtagatttc
tcctacccatctaggccagaagtgagaatcctcaacaattttaccctgaatgttccggcc
ggcaagaccatagctttggttggcagcagtggatctggtaaaagcactgtggtctccctc
attgagagattctatgatcccaactcagggcaagttctggtagatgggcatgatataaag
acattaaagctgagatggctgagacaacaaatagggcttgtgagccaagagcctgccctg
tttgccacctccattaaagaaaatatactgttgggtagacctgatgcagatcaaattgag
attgaagaagctgccagagttgccaatgctcattcatttattgtcaagctccctgaagga
tttgacactcaggtaggtgagagaggactgcagttgtctggagggcaaaagcagagaata
gctatagcaagagcaatgctgaaaaatcctgctattctgcttttagatgaggcaacaagt
gcactggactctgagtcggaaaaactggtgcaggaagctcttgacagattcatgattggg
aggacaacacttgtaattgcccacaggctctcaactatccgaaaggcggatcttgtagca
gtactccagcagggtagtgtcaccgaaattggaacacatgacgagctcattgccaaagga
gagaatggtgtttatgccaagcttatcagaatgcaggaagcagctcatgaaacagctatg
aacaatgcaaggaagagcagtgcaaggccttcaagtgccagaaactctgtgagctcacca
attattgcacgtaattcatcttatggacgatcaccgtactcgcgcaggctatcagacttc
tctacctcagattttagtctctcccttgatgctgcataccctaattaccgacttgaaaag
cttccttttaaagagcaagctagttcattctggcgacttgcgaagatgaactctcctgaa
tgggtttatgcgctagttggttctataggctccgttgtttgtggctcactgagtgccttc
tttgcctatgtcctcagtgctgttctcagtgtttactataatccaaaccatgcttatatg
agcagagaaattggaaagtattgctatttgttaattggactttcatcagctgcactaatt
ttcaacacattgcagcatttcttctgggacattgtaggagagaatcttacaaaacgagtg
agggagaaaatgctggcagcagtgctaaaaaatgaaacggcgtggttcgatcaggaggaa
aatgagagtgctaggattgcagcgagattagctctcgatgcaaataatgtccgatcagcc
attggagataggatttcagtgattgtacagaatacagcactgatgctagtcgcttgcact
gccgggtttgttttgcagtggcgcctcgcccttgtccttatagccgtcttccccttggtc
gttgcggccactgtcctacagaaaatgttcatgactggtttctctggagatctagaagct
gcacatgccaaagccacacaactagcaggagaggccatagccaatgtaaggacagttgct
gctttcaattcagaatcacagatagtcggacttttcaccaccaaccttcagattcctctc
cgacgctgcttttggaaggggcagatagctggaagtggatttggagtagcccagtttttg
ctctatgcttcctacgctcttggtctttggtatgcttcttggctggtgaagcatggaatc
tccgatttctcaaagacaatcagagttttcatggtccttatggtttctgccaatggagca
gcagaaacattaaccttagctcctgactttatcaagggtggtcgagccatgcgctcagtt
tttgaactacttgaccgcaaaacagaaatcgaacctgatgaaccagatgccactgcagct
cctgatcgtcttcgtggagaagttgaactaaaacacatagacttttcttatccgactcgc
cctgacgtcccaattttccgcgatctgaatcttcgtgcaagagctggaaaaactctagcc
cttgtaggtccaagtggatgtggcaagagctcagtcattgcactggtacagagattctac
gagccgtcatctggaagggttataattgatgggaaggacataagaaaatacaacctcaag
tccctgagaaagcacattgctatggttcctcaggaaccatgcctctttgctgctaccatt
tatgaaaacattgcatatgggcacgaatcagcaaccgaggctgaaatcattgaagctgct
actttagccaatgcccataaatttatatcaggattgccagatgggtataaaacatttgta
ggggagaggggagtccagttatctggaggacaaaaacaaagaattgccatagctcgagct
ctagtaagaaaggcagaactcatgctacttgatgaggcaacaagtgcattggatgctgag
tctgagagatcagtccaggaggctcttgatcgtgcttgttcaggaaagaccaccattgta
gttgcacacagactatcaactataagaaatgcacatgtcattgctgtgatcgatgatgga
aaagtagcagagcaaggatctcactctcatctgctgaaaaattatccggatgggtgttac
gctcggatgatacagctgcaaaggttcacacataaccaagtcattggaatgacttcaggt
tcaagttctagatcgaaagacaacggcgagagggaagcttga
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integrated database retrieval system
