Manihot esculenta (cassava): 110625915
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Entry
110625915 CDS
T05761
Name
(RefSeq) golgin candidate 5 isoform X1
KO
K20286
TATA element modulatory factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110625915
Membrane trafficking [BR:
mesc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110625915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
110625915
NCBI-ProteinID:
XP_021627301
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All DBs
Position
11:complement(3631943..3641781)
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AA seq
948 aa
AA seq
DB search
MAWFSGKVSLGNFPDLAGAVNKLSESVKNIEKNFDSALGLEEKPDSSSEASGLWPGAWNS
DEDSNTESSAKPGSSEKFSRVEEDETQNSANEKPTVERENQVLKNEKEDENLKIAGKEDA
VISDTVQPESESQFVPVEHREPVIHDVQTLDSVGNSQEKQILEMGPAESSESVEVKTGSV
QVDQDEDDTVMHDESYTVVDRNESKDEHKMQMEEVVKEGSPVLAEISNDAQSEASSDTQA
EVAINPSGFPVTAEETQMASEVSFPTAVLSDEASETVSDESDVNVKTVGDVRQVNDGEID
AKEQRLSSERLSSASNVSDSLDSLVELEKVKMEMKMMETALQGAARQAQAKADEIAKMMN
ENEHLKSMIDDLKRKSNDAEIESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAA
LLLKEKDEIISQVMAEGEELSKKQAAQESTIRKLRSQIRELEEEKKGLMTKLQVEENKVE
SIKKDKTATEKLLQETIEKHQAELAGQKEYYTSALTAAKEAEALAEARANSEARTELENR
LREAGERESMLVQALEELRQTLSRKEQQAVFREDMLRRDIEDLQKRYQASERRCEELVSQ
VPESTRPLLRQIEAMQETMARRAEAWSAVERSLNSRLQEAEAKAAAAEERARSVNERLSQ
TLSRINVLEAQISCLRAEQTQLSKSLEKERQRAAENRQEYLAAKEEADTQEGRVNQLEEE
IKELRQKHKQELHDALMHRELLQQEIEREKAARLDLEKTACIHSTAASDQTPKSNSGFEN
GNMKQKLSSASSLGSMEESYFLQASLDTSDSFSERRNPGEVTMSPYYMKSMTPGAFEAAL
RQKEGELASYMSRLTSMESIRDSLAEELVKMTAQCEKLRAESALLPGVRAELEALRRRHS
AALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQRMSPSMVNT
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtttagcgggaaggtgtccttggggaacttcccggatcttgctggtgcagtg
aataagctcagtgagagcgttaagaatattgagaagaactttgatagcgctcttgggttg
gaggagaagcccgattctagcagcgaagcttcaggactatggcctggtgcgtggaactca
gatgaggatagcaatactgaatcttcagcaaaacctggatcttcggagaaattttctaga
gttgaggaagacgagacacaaaattctgccaatgaaaaacctacagttgaaagagaaaat
caagtgctcaaaaatgaaaaagaagatgagaatctgaagattgcaggaaaagaagatgct
gtaatttcagacacagtccaacctgagtctgaatcacaatttgtacctgttgaacatcgt
gaacctgtcatacatgatgttcagacgttagattcagttggcaattcacaggagaagcag
atcttagaaatgggccctgctgaaagttcagagtcagtagaggtcaagacaggatctgtt
caagttgatcaggatgaggatgatactgtcatgcatgatgaatcatatacagttgttgat
aggaatgagagcaaagatgaacataagatgcaaatggaggaggttgtaaaagaaggttct
cctgttctggctgaaatctcaaatgatgctcaatctgaggcatcaagtgatactcaagct
gaagttgcaattaatccatctggttttccagttactgctgaagagacgcagatggcttct
gaagtttctttccctactgctgttctctcagatgaggcttcggaaacagtttctgatgaa
agtgatgttaatgttaagacagttggagatgtcaggcaagtcaatgatggtgaaattgat
gctaaggagcaacgtttgagctcagaacgtctgagctcagcgtcaaatgtgtctgactcc
ttagattcacttgttgaactagagaaggtgaagatggagatgaaaatgatggaaactgca
ttgcaaggtgctgcaaggcaagctcaggcaaaggctgatgagattgcgaagatgatgaat
gaaaatgagcacctgaaatcaatgatagacgatttgaagagaaaatctaatgatgcagaa
attgagtctttaagagaggaataccatcaaagagttgcaacccttgaaagaaaggtttat
gcccttacaaaggaaagggatacactccggagagagcagaataagaaaagtgatgcagct
ctacttttgaaggaaaaagatgaaatcatcagtcaggttatggctgaaggtgaagaactt
tcaaagaagcaggctgctcaagaatctacaattaggaaattaagatctcagattagagag
cttgaagaggagaagaaaggcttgatgactaaacttcaggtggaagagaataaagtagag
agtatcaagaaggacaagacagctacagaaaagttgctgcaagagacaatagaaaagcac
caagcagaacttgcagggcagaaagagtattatacaagtgctttgactgctgccaaggag
gctgaagcattggcggaggcacgtgctaatagtgaagccagaactgaattagagaaccgt
ttgagggaggcaggggagcgtgagagcatgctggttcaggcacttgaagaattaagacag
actttgagtagaaaggagcagcaggctgtttttagagaagacatgcttcgcagggacata
gaagaccttcaaaagcgttatcaagcaagtgagcgccggtgtgaggagttggtttctcaa
gttcctgagtctacaaggcctcttctaaggcagatagaagcaatgcaggaaacaatggcc
agaagggctgaagcttggtctgccgttgagagatctctaaattctcgactccaggaagca
gaggccaaagctgctgctgctgaggaaagagcgcgatctgtgaatgaacgtttgtcgcaa
accctatcacgaattaatgttttggaagctcagatttcatgtcttagagcagagcagacg
cagttaagtaagtcccttgaaaaagagagacagagagcagctgaaaataggcaggaatac
cttgcagccaaggaggaggctgacactcaagaaggtcgtgtgaaccaacttgaagaagaa
attaaagaacttaggcagaaacacaagcaagagttacatgatgccctgatgcacagggag
cttctacagcaggaaattgaaagggaaaaagctgctcgattggatctggaaaaaacagct
tgtatacattccactgctgcatctgatcaaacaccaaagagcaactctggttttgagaac
ggaaacatgaaacagaagctctcaagtgctagcagcctaggcagcatggaggagagctat
tttctgcaagcatctttggacacatctgacagtttctctgagagaagaaatcctggagag
gtaaccatgagcccatactacatgaagagtatgacacctggtgcttttgaagctgctctt
cgtcagaaagagggtgaacttgcatcatacatgtctcgtttgacatctatggaatcaatc
cgcgactctcttgcagaggagttggttaaaatgacagcacagtgtgaaaagttgagggca
gagtctgccttgttgcctggcgttcgagcagaactggaagcattaaggcggaggcactca
gctgcactggagttgatgggtgaacgtgatgaggagttggaggaacttcgtgctgatatt
gtagacttgaaagaaatgtatagagagcaagttaatttgcttgtgaacaagatccaaaga
atgagtccatcaatggtcaatacctaa
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