Manihot esculenta (cassava): 110628301
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Entry
110628301 CDS
T05761
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
KO
K14963
COMPASS component SWD3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110628301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110628301
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
110628301
NSL complex
110628301
HMT complexes
COMPASS/SET1 complex
110628301
COMPASS/SET1 complex (yeast)
110628301
MLL-HCF complex
110628301
MLL3/MLL4 complex
110628301
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110628301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
WD40_like
RMC1_N
PROPPIN
DUF5888
Caudo_bapla_RBP
Motif
Other DBs
NCBI-GeneID:
110628301
NCBI-ProteinID:
XP_021630600
LinkDB
All DBs
Position
12:complement(32380576..32383184)
Genome browser
AA seq
320 aa
AA seq
DB search
MSTTDPAESFKPYHLTQTLTGHKRALSAVKFSSDGRFLASSSADKTLRTYSLSPSNPPTS
PLTPLHEFQGHEQGVSDVAFSSDSRFLVSASDDKTIRLWDVTTGSQIKTLQGHTNYVFCV
NFNPQSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC
RIWDAGTGHCIKTLIDDENPPVSYVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGH
TNSKFCISSTFSITNGKYIVSGSEDNCVYLWELQTRKVVQKLEGHTDTVISVACHPTQNM
IASGALGNDKSVRIWTQERE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaacagacccagccgaatccttcaaaccctaccatctaacccaaactctaacg
ggccacaagcgtgctctctcagccgtcaaattctcttccgacggccgctttctcgcttcc
tcctccgctgacaaaaccctcaggacctattccctttccccctccaatcctcctacttct
cctcttactcctctccatgaatttcaaggccacgagcaaggcgtctccgatgttgccttc
tcttccgactcccgtttccttgtctctgcttccgacgacaagaccattcgcctctgggac
gtcaccaccggctcccagatcaaaactctccaaggccatactaattatgtcttctgtgtc
aactttaatccgcaatccaacatgatcgtctcgggttcttttgatgagacggttaggatc
tgggatgtgaagagcggcaagtgtttgaaggtgcttccggcgcattctgatcctgttaca
gctgtggatttcaatagggatggttcgcttattgtttcgagtagttatgatgggttgtgt
aggatttgggatgctgggactggccattgtattaagactttgatagatgacgagaatccg
cctgtttcatatgtcaagttttcgcccaatggcaagtttattcttgttggcaccttggat
aacactttgaggctttggaatttctccacagggaaatttctgaagacatacactggacat
actaattcgaaattctgcatatcatccaccttttctataacaaatggaaagtacattgtc
agtggttctgaagataattgtgtatatttgtgggaacttcaaaccaggaaagtagttcaa
aaattggaaggtcatactgacactgttatatcagtagcatgccatcccactcagaacatg
attgcatctggtgctcttggcaatgacaagagtgtgaggatctggactcaggaaagggaa
tga
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