Methanocaldococcus lauensis SG7: MLAUSG7_0395
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Entry
MLAUSG7_0395 CDS
T07631
Symbol
lig
Name
(GenBank) DNA ligase
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mesg
Methanocaldococcus lauensis SG7
Pathway
mesg03030
DNA replication
mesg03410
Base excision repair
mesg03420
Nucleotide excision repair
mesg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLAUSG7_0395 (lig)
03410 Base excision repair
MLAUSG7_0395 (lig)
03420 Nucleotide excision repair
MLAUSG7_0395 (lig)
03430 Mismatch repair
MLAUSG7_0395 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesg03032
]
MLAUSG7_0395 (lig)
03400 DNA repair and recombination proteins [BR:
mesg03400
]
MLAUSG7_0395 (lig)
Enzymes [BR:
mesg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MLAUSG7_0395 (lig)
6.5.1.6 DNA ligase (ATP or NAD+)
MLAUSG7_0395 (lig)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
MLAUSG7_0395 (lig)
DNA replication proteins [BR:
mesg03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MLAUSG7_0395 (lig)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MLAUSG7_0395 (lig)
DNA repair and recombination proteins [BR:
mesg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MLAUSG7_0395 (lig)
NER (nucleotide excision repair)
Other NER factors
MLAUSG7_0395 (lig)
MMR (mismatch excision repair)
Other MMR factors
MLAUSG7_0395 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
CAB3287796
UniProt:
A0A8D6PQ90
LinkDB
All DBs
Position
I:complement(341080..342813)
Genome browser
AA seq
577 aa
AA seq
DB search
MLWKDVCEIFDKIEKTTKRLEKRDLFIKLIDMVKEKGTPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAVTSIGIKKDELLEKIKETGDIGLAIEKLKSKIKQSYLFFQPLTVDEVY
NTLKRVGEIEGEGSVKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILEALSV
YFNVPKEKLEKLYAITNDIGLLAEKLLRGNLDDEELKLKIFRPIKPMLAQIAPSIEEALL
EMGRAQFETKYDGARVQIHKDKDKVKIYSRRLEDVTNALPEIVEAIKKINVDQLIVEGEC
VAIDKNTGKPRPFQDILRRFRRKYDIGKIMKEINLRVYLFDILYKNGESFIDEEFENRRK
VLEEIVGYENDWRTERERIEKELRSDKIIDISYKLVTNDPKEAKEFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLENLDVVITKAKRGMGKRKDWYGSFEICVRDEEGNLYP
IGHVGTGLTESDLEMLKEEIDKIIIRDLGEEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGKDDINTIEDVKRIYEIQRGRKQNNK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctatggaaagatgtttgtgaaatatttgacaaaattgaaaaaaccactaaaagattg
gaaaaaagagatttatttataaaattaattgatatggttaaagaaaaaggaacaccagaa
gatttaaaaaagatttgttacatggcaataggtagagtttatccagaatatgatgaaaga
gaattaggaattggagaaaaacttttaattaatgcggtaacatcaataggaattaaaaaa
gatgaattattggagaaaattaaagaaactggggatattggtttagctattgaaaagtta
aagtcgaaaattaagcagtcctatttattttttcagccattaacggtagatgaagtttat
aatacattaaagagagttggagagattgaaggagaaggttcagtaaagaaaaagttgaga
ttaataagtagtttatttttaagagcgtcaccaattgagtgtagatatttagcgaggtta
atattggaggatatgagaatagggatgaatgttcctactatattggaggcactttcagtt
tatttcaatgtgcctaaggaaaaattggaaaaattatatgctataaccaatgacattggg
cttttagctgagaaattattaagaggaaatttagatgatgaagaattaaaattaaaaata
tttagaccaataaaacctatgctggcacaaattgctccatcaattgaagaggctttatta
gaaatgggtagggcacaatttgagacaaagtatgatggagcaagagttcaaatacacaaa
gataaagataaagttaaaatttacagtaggagattggaagatgttacaaacgctcttcct
gaaattgtagaggctattaaaaaaattaatgtagatcagttaattgttgaaggagaatgt
gtagcaattgataaaaatactggaaagccaagaccatttcaagatatccttaggaggttt
agaagaaagtatgacattggaaagataatgaaggaaattaatttgagagtttatttattt
gacatactttataaaaatggagaatcatttattgatgaagagtttgaaaatagaagaaaa
gttttagaggaaattgttggttatgaaaatgattggagaactgaaagggaaagaatagag
aaagaactgagatcagataaaattattgacatatcttataagttagttactaacgatcca
aaagaggctaaagagttttataattggagtttatctatagggcatgagggagttatgatt
aaaaatctaaaagccccatatacaccgggaagtagagttagaactatgtataaatttaaa
ccaactcttgaaaatttagatgttgtaattacaaaggctaaaaggggaatgggtaagaga
aaagattggtatggttcttttgaaatttgtgttagggatgaagaaggtaatttatatcca
atcggacatgtaggaactggattgactgaaagtgacttagaaatgttaaaagaggagatt
gataaaataattattagagatttaggggaagaggtagaagttgagccaaaaattgttatt
gaagttgcttatgaagaaatacaaaaatctgataagtatccctgtggatatgctttaaga
ttcccaagagttgtaagatttagatttgacaaaggtaaggatgatataaacacaatagag
gatgtaaaaagaatttacgaaattcaaagaggtagaaaacagaataataagtaa
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