Methylobacter sp. S3L5C: KKZ03_05255
Help
Entry
KKZ03_05255 CDS
T08037
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mesl
Methylobacter sp. S3L5C
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesl03032
]
KKZ03_05255 (gyrB)
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_05255 (gyrB)
Enzymes [BR:
mesl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KKZ03_05255 (gyrB)
DNA replication proteins [BR:
mesl03032
]
Prokaryotic type
DNA Topoisomerases
KKZ03_05255 (gyrB)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KKZ03_05255 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1
Motif
Other DBs
NCBI-ProteinID:
UOA09691
LinkDB
All DBs
Position
complement(1142304..1144718)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNNNDHYDSSNIQVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCK
EVKVIIHSNGSVSVSDDGRGIPVDIHKEEGRSAAEVIMTILHAGGKFDDNAYKVSGGLHG
VGVSVVNALSEELNLEVRKNGQLYKQQYRMGNPVAPLAAFGPTEGSGTLINFKPSTETFT
DVEFHYDILAKRLRELSFLNSGVRISLHDERTDRSDVFEFEGGIAAFVVHLNKNKTPLFP
EVFYFIAEKEGVTVEVAMQWNDSYQENVFCYTNNIPQRDGGSHLAGFRGALTRTINQYIE
SSGLAKKEKVQTTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPLVESTMNEKLQ
EFLLEKPQIAKTIVGKIVDAARAREAARKAREMTRRKTTLDIAGLPGKLADCQEKDPALS
ELFLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMISSEEVGTLITALGCGI
GKDEYNLAKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQLPEIVEKGYIYIAQPPLYKVK
KGKQEHYVKDDVQLNEYLIQLALDKAQLFTDETTPPIQGQGLEKLAKEFTGVESVVNRLS
RRYDAVFLEQFSYMEVINDEIKQDQQKLITWFAKMEQQLRDCESKAVFTIELNYRASNDF
SAVVNKKLHGITKTFVLPSTFFNGKDYQKIAQYATDTAGMFNEASYMQMGERQQPVSTFK
QAFEWMMKEIKKGQHIQRYKGLGEMNPEQLWETTLDSNNRRLLQVRIEDVIAADEIFTTL
MGDVVEPRRDFIVKNALDVTNLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaataacgatcactacgatagttctaatattcaagttttaaaaggtctggat
gccgtaagaaaacggccgggtatgtatattggcgatactgatgatggctccggtttgcac
catatggtttttgaagttgttgataactccattgatgaggcactggccggttactgtaaa
gaagttaaggtaattatccatagtaatggatcggtttctgtttctgatgatggtcgaggc
attcctgttgatattcataaggaagaaggacggtcagccgcagaagttattatgaccatt
ctgcacgcaggcggtaaatttgatgataatgcttataaggtatctggcggtttacacggt
gtaggtgtttctgtagttaatgccttgtctgaagagttaaatctggaagtacgaaaaaat
ggtcagctttataagcaacagtatcgtatgggaaatccggtagcgccattggcagcattc
ggtcctactgaaggctctggcaccttgattaattttaaacccagtactgaaacatttaca
gacgttgaatttcattacgatattttagcgaaaaggttaagagaattatcatttttaaat
tcaggtgtacgcatcagtttgcacgatgaacgcactgatagaagtgatgtttttgaattt
gaaggtggtatagcggcttttgttgtgcatcttaataaaaacaaaacaccattatttcct
gaagtcttttattttattgctgaaaaagaaggcgtgacggtagaagttgccatgcaatgg
aacgattcttatcaggaaaatgtattctgctataccaataatattccacaacgtgatggt
ggaagtcatttggccggattcagaggcgcattaacacggactatcaatcaatatattgaa
tccagtggtttggctaaaaaagaaaaagtacaaacaaccggtgatgatgccagagaaggt
ttaacggcagtgctttcagttaaagtacccgatcccaaattttcatcacaaacaaaagat
aaactggtttcatcagaggttaagccactggttgaatcaacaatgaatgaaaagctgcag
gaatttctactggaaaaaccacaaatagctaaaacgattgttggtaaaattgtcgatgca
gcccgtgccagagaagctgcacgtaaggcacgtgaaatgacacgtcgtaaaaccacgttg
gatattgccggtttgccgggaaaattagctgattgtcaggagaaagatcctgcgttatct
gaattatttttggtcgaaggagattctgcgggtggttcagcgaaacagggtagagatcgt
cgtactcaagctatcctgcctttaaaaggcaagattttaaatgttgagaaagcgcgtttc
gataaaatgatttcttcagaagaagtcggtaccttaataacagcattgggatgtggaata
ggtaaagacgaatacaatctggccaagttacgttatcaccgcatcattatcatgactgat
gcggatgttgatggatcacatatcaggacattattgttgacgtttttttatcgacaattg
ccggaaatagtcgaaaagggctatatctacattgctcagccgccgttatataaagttaaa
aaaggtaaacaagaacattacgttaaggatgatgttcaattaaatgaatacctgattcag
ttagcactcgataaagcccagctttttactgatgaaacaacgccgcctattcaggggcag
ggtctggaaaaacttgccaaagaatttaccggagtagaaagtgtcgtcaatcgtttatcc
agacgttacgatgctgtttttctggaacaattttcttatatggaagtgattaacgacgag
attaaacaagatcagcaaaaactcattacctggtttgccaaaatggaacaacaactgagg
gattgtgaaagtaaagctgtgtttacgatagaactcaattacagagcgagcaatgatttt
tccgctgtggtcaacaagaaactgcacggcatcactaaaacctttgttttgccatcaact
ttttttaacggcaaagattaccaaaaaattgcccagtacgcgactgatacggcgggcatg
tttaatgaagcctcatacatgcaaatgggggaaagacaacagccagtcagcacctttaaa
caagcttttgaatggatgatgaaggaaattaaaaaaggccagcatatacagcgttataaa
ggcttgggtgaaatgaatcctgaacaattatgggaaactacactggattccaataatcgt
agattgctacaagtcagaattgaagacgtgattgccgctgatgagatttttactaccctg
atgggtgatgttgtagaacctcgacgtgattttattgttaaaaatgctcttgacgtcact
aatttagacgtttaa
DBGET
integrated database retrieval system
