Methylobacter sp. S3L5C: KKZ03_08810
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Entry
KKZ03_08810 CDS
T08037
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mesl
Methylobacter sp. S3L5C
Pathway
mesl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KKZ03_08810 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesl03400
]
KKZ03_08810 (recD)
Enzymes [BR:
mesl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KKZ03_08810 (recD)
DNA repair and recombination proteins [BR:
mesl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KKZ03_08810 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
UvrD-helicase
AAA_22
RecD_N
SLFN-g3_helicase
DEAD
nSTAND3
UvrD_C
T2SSE
AAA_18
AAA_28
Mg_chelatase
TrwB_AAD_bind
ResIII
Herpes_Helicase
NTPase_1
SRP54
TIP49
Motif
Other DBs
NCBI-ProteinID:
UOA10312
LinkDB
All DBs
Position
complement(1939977..1941959)
Genome browser
AA seq
660 aa
AA seq
DB search
MTKGLSVLDSIDNWISLGWLTHLDRAFVRFLIDQEPDASDRVLWAGALASHQLGRGEVYL
EMEKLCQQPELTLAISGDDDNQTEVDESTIGALSDAQALAELLTLKAYTLEQWQTALSAS
SLVGLGHGNTPLVLEGNRCYLRRYWQYQQILDQAIQQRLQPIRTELPTALQAQLQLLFAA
KSPESPDWQKIACVLALRARFAIITGGPGTGKTTTLTKLLALLIKLANDESGNTRKLNIL
LAAPTGKAAARVSESISKALEKLQVPEDIKQVIPKKASTLHRLLGTRHDSRHYVHHRNNP
LVADIVIIDEASMIDLEMMASLLDALPESTSLILLGDKDQLASVEAGSVMGDLCRGAENS
AYDEPTHAWIRPYSDEALSENALVGSAINQQTVMLRHSHRFGEHSGIGQLAKAVNKGDSK
LAQAILKDTTSYQDLGHLLLSHPADIHLKNLLTANTGLQDDSQPKNRQGYGYYLDVIRKK
RPTDKMQYPHWAKQVLEAFDTFQVLCALRLGPWGVEGLNQRIEQWLFPGQKPTLWYEGRP
VMITRNDYNLGLMNGDVGITLKDSTGKLRVAFPGEDAHDAVNILWISPMRLPDVETAFAI
TVHKSQGSEFNHVALVLPETKSPVLTRELVYTAITRAKENFTLLESHADIFNQAILATCK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggattatctgttcttgacagtatcgataactggatcagtctgggttggtta
acgcatttggacagggcttttgtacgctttctcattgatcaggagcctgatgccagtgat
cgggtactttgggctggagcacttgccagtcatcagttgggccggggtgaagtttatctg
gagatggaaaaactctgtcaacagcccgaattaacgctggctatttctggcgatgatgac
aaccagaccgaggttgatgaatcaacaataggcgctttaagcgatgcgcaagcccttgcc
gaattattgacacttaaagcttatacactcgaacaatggcaaacggctctgagcgcatca
tcgctggttggcttgggtcatggcaatacgccactggttctggagggcaatcgctgctat
ttacggcgttattggcagtatcagcaaatactcgatcaagccatccaacaacgactgcaa
ccgatcagaaccgaactgcccaccgctttgcaagcgcaattacagttgttgtttgcggcc
aaaagccccgaaagtcctgattggcagaaaattgcctgcgtattggcattgcgtgcacgc
tttgccatcattaccggcggccccggcaccggcaaaaccacgacgctgaccaagctgctg
gccttactgattaaactggctaacgatgaatccggcaatacccgcaagctcaatatttta
ctggcagcacctaccggtaaagccgcagcgcgggtcagtgaatcgatcagcaaagcgtta
gaaaaactacaagttcctgaagacattaaacaggttattcctaaaaaagcgagcaccctg
catcgcttgctgggtactcggcacgactcacggcactacgtccatcatcgcaataatcct
ttggtagctgacatcgttatcattgatgaagcgtcgatgattgatttggaaatgatggca
tcattgctggatgccttgccggaaagcaccagtttaatattgctgggggacaaggatcaa
ttggcttctgtcgaggcgggttcggtgatgggggatttatgtcgcggcgctgaaaacagc
gcttatgacgaaccaacccatgcttggatcaggccgtatagtgatgaagcactcagtgaa
aacgccctggttggctcggctattaaccagcaaactgtcatgcttcgccatagccatcgt
tttggtgagcacagcggtatcggtcaattagccaaagccgtcaacaaaggtgattccaaa
ctggctcaggctattttaaaagataccacaagctatcaggatcttggtcacctactgttg
agccatccggctgatatccatttaaaaaacttgctaacagccaataccggactacaggac
gatagccaacctaaaaatcgccaaggctatggttattatcttgacgttattcgaaaaaaa
cgcccgaccgataaaatgcaatacccgcactgggcaaaacaggttttggaagcctttgat
acttttcaggttctctgcgctttgcggctaggtccttggggcgttgaaggtttaaatcag
cgtatagaacagtggttatttcccggccaaaaaccaacgctgtggtatgaaggccgcccc
gttatgatcacccgcaacgactacaatctgggcttgatgaatggcgacgtcggtatcact
cttaaagatagtaccggaaaactgcgggtagcttttcccggcgaagatgcgcacgatgcg
gtaaacattctttggatatcacccatgcggctaccggatgtggaaacggcctttgccatc
acggtacataaatcccaaggctcggagttcaaccatgttgcactggttctgccggaaacc
aaaagcccagtactgacccgtgaactggtctacaccgcgattacccgagcgaaagaaaac
ttcaccttactggaaagtcatgcggatattttcaatcaggctattttagcgacttgtaaa
taa
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