Mesorhizobium sp. Pch-S: C1M53_19385
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Entry
C1M53_19385 CDS
T05918
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
KO
K20276
large repetitive protein
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M53_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
SprB
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QAZ44782
UniProt:
A0A4V0YPH6
LinkDB
All DBs
Position
complement(4119676..4125840)
Genome browser
AA seq
2054 aa
AA seq
DB search
MNWNTKYRTERARTLASGFVLWLGMLALVCLAAGAASPVQAAPSVGCPTPIAITVVSGGS
KQINASSCDPFGTNPQSDVVQPAHGHVTIDNAAAGLLTYVNNGDGATTDTFTFKDASAGV
VTVNVTITPASSPITVSPASLPTPQISVFYDQTLTSANGTAPYTYTPGGGSLPPGLTLAT
NGRISGTPTGSGPYNYTVHVTDSTSPTALTADKSYSFSVPGPTMVVSPASPAAGAQGIAY
SQQFSTSGGTAPYAYTLETGTLPPGLSLSGGGLLSGTPTTLGSFTFTIKVQDSTTISTGG
VWLKLHTVTVDINAAPTIVVAPTTLPGGAAVGSAYSTTVTASGGVSPYTFSVISGSLPAG
LTLAPGGTISGTPTAGGTFNFTVRATDASGAPGPFSGTQPYSLTVAAPTITLPATTLANG
TMGAAYSATLNPASGGTSPYTYVVTAGALPPGITLSASTGTLSGTPTAAGNFNFAVTATD
NSTGTGAPYSSAPRGYALTIVNIPPVANPVSATVGYNSGANPITLNTTGGTPTSVAIGTA
AANGTAIASGTSITYQPNTGFRGSDSFTYTATNSAGTSAPATVTITVSNPTITVTPSNAL
TAQIGVAYTQTFTASGGAAPYTLAVSGLPAGLSTTGTTSSSVTVSGTPTAAGSFNLDVTG
TDSSTGTGPVSISQPFTLSVSAPTLALTPPAGTLSATYATAYSQQYTASGGTGPYTYTVS
AGALPAGLSLDPTSGVLSGTPTVTGLFTFSVRATDSSTGTGAPFARTQNYVMQVAAPSIV
VSPSTLTNATAASSYSATFTASGGIGPYTFSTVPATLRAGLSLATDGQLTGTPTQSGTFA
FTVTATDANGQTGTRPYNLTVGLPSLTVSPPSLPDGSVASGYNQTLSASGGNSPYTFAIT
SGAQPAGLTLSTTGTLSGTPTAPGTFNFTVTATDSTTGTAATGSTAYSVQIIDIPPVANP
VSATVGYGSSANPVTLNITGGAALSVAIATLADHGTATATGLSISYTPTPGYRGPDTFTY
TATNSGGTSAPATVTITVGDPTIVVNASGPLAAQVGATYTQTFTASGGAAPYTVAVSGLP
AGLSTTGTTSNSVTVSGTPTAAGSFNLTVTATDSSSGTGPVSISQPFTLTVGAPTLGLTP
PAGTIPVTYGAAFSQQFTASGGTTPYSYTVSAGTLPTGLNLSGSGELSGTATVPGSYNVT
VRATDSSTGAGAPFSTDVSYTLQVATPVVVVNPTTLANATAGSNYSDTVTATGAVAPYSF
SVTAGTLPPGMVLGPTGALSGTPTAAGNFSFTITASDAHGQTGSRPYTMTVAVPSLTMLP
PSVPSGTAGTAYSQTLTASGGNAPYTFSVTAGALPTGLTLSGAGLLSGTPTVDGTFNFTV
TVTDSTTGTAGTTSVAYTLVIAAPTITLSPGALPDGQYGLPYNQALTANGGSTPYGFAVT
SGTLPPGISLSSAGVFSGTPTVVGSSTFTVTATDHLGYTGSAVYTLAIANNPPVANPDTA
QTLDGQPVTINVLANDTGTITAIAIVSAPGHGTAIVSGTDIVYTPGASFTGSDSLQYTAS
GPGGTSAPALVTVNVRPRPVAVAQSVTTMSGKAVVVDLAKDASGGPFTSASLVSVPPSSS
GTTSLNGYQMTFTPTTTFEGTVTVTFTLSNAYATSAVTAITINVQGRPDPTRDSEVMGIL
NAETAATRRFANSQIGNFQQRLEGLHDGDNGQEPTDTLAFVQGIALSFNSTCGKDDLVPH
GESCGSRQVAAEKDLPFKSYLDDSTTASTPGGFGTGSFGHSKVTIWTGGSINVGDREGDD
GYKFETTGLSGGIDYRFSRAFALGLGVGYGRDVSDIGDNGSRSTGKAYTAGLYASYHPGQ
NFFIDGLLGYQWLSFDSKRYLTSGGGFVTGERDGGQWFASVSAGAKYQVENWLISPYARL
DVARATLDAFTEKGDPSLALHYGEQDIDTVTGNLGLRLAYKIPVSFGVITPQLRLEYQHD
FQGDSAITMNYADMFGGPFYHTSIDGSAKDRFMLGLGMNIQTTQDFAVRLEYRGLFGSDG
GTDNGFLINLGKKF
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
ttgaactggaatacaaagtatcgcaccgagcgtgcgcgtacgcttgcaagcggcttcgtg
ctgtggttgggcatgctggcgcttgtttgcctcgctgccggggcggcctctccggtacag
gcggctccgtcggtcgggtgccccacacctattgccatcacagtggtgtctggtggcagc
aaacaaatcaatgcgtcgtcatgcgaccccttcggcacaaacccgcaaagcgacgtggtg
caacccgcgcatggacatgtaacgatcgataatgccgccgcaggattgctgacctatgtc
aacaacggcgatggtgccaccacggacaccttcaccttcaaggacgcctctgctggtgtc
gtgacggtcaacgttacgatcacccccgcctcctcgccgattaccgtcagcccggcaagc
ctgccaacgccccagatcagcgttttctatgatcagaccctgacatccgccaatggcacg
gcgccctatacctacactccgggtggcggcagcctgccgccggggctcacccttgcgaca
aacggcaggatttcaggcactccgaccggctcaggtccctacaattataccgtgcacgtg
acggattcgacatcgcccacggcattgacggccgacaaaagctacagtttcagcgttccc
ggaccgacaatggttgtttcgccggccagccctgcagctggcgcgcagggtattgcctac
agccagcaattcagcacgagcggcggtactgcgccttatgcctacactcttgaaacaggc
accctgccgcctggattgtcactgtccggcggcggcctgctttccggcaccccaacgacc
ctgggcagcttcaccttcacgataaaagtgcaggacagcaccacgatctcgactggcggt
gtctggctgaaactccacaccgtaaccgtcgacatcaatgccgcgccaaccatcgtggta
gccccgacaaccctgccgggcggagcggctgtcggatcggcctacagcaccaccgtcact
gccagcggcggcgtatctccctatacattttccgtcatctcaggctcgcttcccgccgga
ctcacgctcgctccaggaggcacgatttccggcacgccgactgcgggcggaacgttcaac
ttcaccgtcagggccacagacgccagcggcgcgcccgggccgttcagcggtactcagccc
tattccctgacggtcgccgcaccgaccatcacgctgccggccacgactttggccaatggc
acgatgggcgcggcttattcggccacactcaatccggcttccggtggcacctcgccctat
acatatgtcgtcacagctggcgcgcttcctcccggcatcactctgtctgcctcaaccggc
accttgtccggtacaccgaccgctgccggcaatttcaacttcgcggtcaccgcaacggac
aacagcacaggcaccggcgctccctattccagcgcgccgcgcggctacgctctgacaatc
gtcaacatcccgccggtcgccaatccggtttcagccactgttggctacaacagcggcgcc
aatccaatcaccctcaacaccacaggcgggacaccgacttccgtcgcgatcggcactgca
gcagccaacgggacggccatcgcgagcgggacatcgatcacctaccagcccaatacgggc
ttccgcggctcggattccttcacctatacggcgaccaattcggcggggacttcggcgccg
gcaaccgtcaccatcacggtcagcaatccgacgatcaccgtcaccccatccaatgcactg
accgcgcagatcggcgtcgcctatacgcagaccttcaccgcatcgggcggcgctgcgcca
tacacactggcggtaagcggcctaccggccgggctttccacaacggggacgacctccagc
agcgttactgtctccggaacaccaaccgcggccggcagtttcaacctcgatgtcacgggc
accgacagcagtaccggcaccggtccggtctcgatttctcagccctttaccctgtcggtg
agcgcaccaacccttgccctgacgccgccggcgggaacactcagcgcgacctatgcgaca
gcatacagccaacaatacactgcctccggcggtacagggccttacacctataccgtcagt
gccggagcactgccggcaggcttgtcgctggaccccacctccggtgtgctctcgggaaca
ccgaccgtaacgggactgttcaccttctcggttcgggcaacggacagcagcaccggcacc
ggcgcaccgtttgcccggacacagaactacgtgatgcaggtcgcagcaccctccatcgtg
gtttcaccctcgacgctgacaaacgccacggcagcttcgagttattccgccaccttcacc
gcatccggcggtattgggccctacacattctcgaccgtaccggccacgctccgggccggg
ctgtcattggccacggatggccagctcacaggcacgccgacacaatccggcaccttcgca
ttcacggtcacggcaaccgacgccaacggccagacaggcacacggccttacaatttgacg
gtcggccttcccagcctgaccgtatcgccccccagccttccagacggctcggtcgcgtcc
ggttacaaccagacactgtcggcaagcggcggtaatagcccatacacctttgccatcacg
tccggtgcgcagcctgcggggctgacattgtccacgaccggcacgctgtcaggcacaccg
accgccccgggtaccttcaacttcaccgtgacggcgacggacagcaccacaggcacggcc
gccaccggcagcaccgcctactcggtccagatcatcgacattccgccagtcgccaatccg
gtgtccgccactgtcggttacggcagcagcgccaatccggtgacgctgaacatcaccggt
ggggcggcgctgtccgtcgctattgccacattggctgaccacggcaccgccacggcaacc
ggcctgtcgatcagctacacgcccacccccggatatcgtggccctgacacgttcacctac
accgcgacaaacagtggtggaacctccgcgccggcgacggtcaccatcaccgtcggcgat
ccgacgatcgtcgtgaacgcctccggtccgctcgcggcgcaggttggcgctacctacacc
cagaccttcaccgcatccggcggcgcggcgccatacaccgtggcggtaagcggtttgccg
gcggggctttccaccacggggacgacctccaacagcgttaccgtctccgggacgccaacg
gcggccggctccttcaatctcaccgtcacagccaccgacagcagcagcggaaccggtccc
gtatcgatatcccagccattcacgctgaccgtcggcgcgccgacgctcggactgacgcca
ccggcgggtaccattccggtgacctatggcgcagcgttcagccagcagttcacggcatcc
ggcggcacgaccccctacagctacaccgtttctgccggtacacttcccaccggcttgaac
ctcagcggcagcggcgagctttcgggaaccgccaccgtgccaggttcctacaatgtcacc
gtcagggcgacggacagcagcaccggagccggagcgcccttctcgaccgatgtcagctac
acattgcaggtcgcgacacctgttgtcgtggtcaatccgacaacgctggcgaacgcgaca
gccggttcaaactactcggacaccgtgacggcaaccggtgcggttgctccctacagcttc
tcggtgaccgcgggcacactgccgcctggcatggtgctcggtccaaccggagcgctgtcg
ggcactccgacggcagccggcaatttttcattcacgatcacggcaagcgacgcccacggt
caaacagggtcacgcccgtacaccatgaccgttgccgtacccagcctgaccatgctgccg
cccagcgtgccatccggcaccgccggaaccgcttacagccagacattgacggcaagcggt
ggcaacgcgccatatacgttctcggttaccgcgggtgcgctgcctaccggcctgactttg
tctggggcaggcctgctttcaggcacgccaaccgtcgacggcaccttcaacttcaccgtg
acggtgaccgacagcacgaccggaaccgccggcaccacgagcgtggcgtacacgcttgtc
atcgccgccccgaccattacgctttctccaggcgctctgccggacggccaatatggcctc
ccctacaaccaggcgctgaccgcaaacggcggcagcacgccctacggcttcgcggtgaca
agcggcacactgccgcccggcatatccctgtcatcggccggcgtcttctcgggcaccccc
acggtcgtcggttcatccactttcacggtgacggcaacggaccatctcggctacacgggg
tccgcagtctacacgctggcgatcgccaacaacccgccggtcgccaatcctgatacggcc
cagacactcgatggccagcctgtaaccatcaacgtcctcgccaatgataccgggacgatc
accgcgatcgcgatcgtcagtgcgccgggacacggcaccgccatagtgagcggcaccgac
atcgtctacacgcctggcgcctccttcaccggctccgacagcctgcaatacacggcgagc
ggtccgggcggaacgtccgcgccggcattggtaaccgtcaatgtcaggccgcgtccggtt
gccgtcgcgcagagtgtcaccacgatgtcgggcaaggcagtcgttgtcgatcttgccaag
gacgccagcggcggtccgttcaccagcgcaagcctggtttcggtgccaccatcgtcatcc
ggtacgacgtcgctcaacggctaccagatgaccttcacgccgacgacgacgttcgaaggc
accgtgacggtgaccttcacgctcagcaacgcctacgcaacctcggcggtgaccgcgatc
acgatcaacgtccaggggcggcccgacccgacgcgcgacagcgaagtcatgggcatcctc
aacgcggagacggccgcgacacgccgcttcgcaaactcgcagatcggcaacttccagcag
cggctggaggggctgcatgacggtgacaatggccaggaacccaccgacaccctggccttt
gtccagggcattgccctttccttcaacagcacctgcggcaaggacgatctggttccgcac
ggcgaatcctgcggcagccgtcaggtagcggccgaaaaggacttgcccttcaaatcgtat
ctggacgacagcaccacggcgagcacacctggcggcttcggcaccggcagcttcggccac
agcaaggtgacgatctggacggggggttcgatcaacgtcggcgaccgggaaggcgatgac
ggctacaagttcgagacgacagggctcagcggcggcatcgactatcgattcagccgtgcg
ttcgcgctcgggcttggtgtcggctacggccgggatgtcagtgacatcggcgacaatggc
agccgcagcaccggcaaggcctacacggcagggctctatgccagctaccacccgggtcag
aacttcttcatcgacggcctgcttggctaccaatggctctcgttcgattccaagcgctac
ctgacatcaggcggtggcttcgtcaccggtgagcgcgacggcggtcagtggttcgcctcg
gtctcggcgggcgccaagtatcaggtcgagaactggctgatttcgccatacgcgcgcctg
gacgtggctcgcgccacgctggatgccttcaccgaaaaaggcgatccgtcactggcgctg
cattatggcgagcaggatatcgacaccgtcaccgggaaccttggtctgaggctggcctat
aagatccccgtcagcttcggcgtgatcacgccgcaactcaggctggagtatcagcatgac
ttccagggcgacagcgcgatcacgatgaactacgcggacatgttcggcgggccgttctat
cacacctcgatcgacggatcggcaaaggaccgtttcatgctcgggctggggatgaacatc
cagacgacgcaggattttgcagtccggctcgaatatcgcggcctgttcggcagcgatggc
ggcaccgacaacggcttcctgatcaacctgggcaagaagttctga
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