Methylobacterium sp. AMS5: Y590_00030
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Entry
Y590_00030 CDS
T04283
Name
(GenBank) ATPase AAA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Y590_00030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_00030
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Y590_00030
DNA repair and recombination proteins [BR:
meta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y590_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
HHH_2
AAA_16
AAA_22
AAA_29
nSTAND3
PIF1
NTPase_1
UvrD-helicase
TrwB_AAD_bind
AAA
DEAD
HHH
AAA_28
MeaB
T2SSE
CbiA
Motif
Other DBs
NCBI-ProteinID:
AMB43267
LinkDB
All DBs
Position
7876..10077
Genome browser
AA seq
733 aa
AA seq
DB search
MNTPLRSSAIDGAASLDMLAGSVERVTFHSAETGFCVLKVHARGRRDLVPVVGHAPAIAA
GEWLTASGRWVTDREHGLQFRADTLQVTPPTGIEGIERYLASGQMRGIGPMMAKRIVARF
GEAVFEIIEAAPARLTEVEGVGRKRAARIVKGWAEQKAVREIMIFLHAHGVGTARATRIF
RTYGGDSLKVMAEDPYRLARDIRGIGFRTADAIALRLGLARDAPQRLAAGVSYALQTAMD
EGHCGLPVERLVRRAADLLDVAPDLVRLAAALALREGREVVADTLRGEPCLFLKGLHGAE
RAIAMRLAERAAGLPPWLAIDFALAKPWVEAKTGKTLSASQAEAVGLVLHSKLCVLTGGP
GVGKTSTLDAILRILTAKGVRVLLAAPTGRAAKRMAEQTGLEARTIHRLLEIDPRNGGFQ
RNEDNPLDCDLLVIDETSMVDVPLMHALLKAVPERAGLILVGDVDQLPSVGPGQMLADVI
ASGTVPVARLTEIFRQAAQSRIVVNAHSINTGRMPTAPAKGEPSDFYLVEIEDADEGVDT
LIELVTRRIPRRFGLDPTRDIQVLTPMIRGSLGSRNLNNALQRVLNPSPSAEVERFGWRF
APGDRVMETRNDYDRDVFNGDLGMVSAIDADDEALVVDFDGRAVIYPFNELDTLVPAVAT
TIHKAQGSEYPAVVIPVVTQHRTMLARNLLYTGVTRGRRLVVLIGQRRALAMAIREGASR
RRWTKLREWLDAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcccctccgctcctcagccatcgatggcgccgcttccctcgacatgctcgcc
ggctcggtcgagcgggtgacgttccacagcgccgagacgggcttctgcgtgctcaaggtc
catgcccgcggccggcgcgacctcgtgccggtggtgggccatgcccccgccatcgccgcg
ggcgagtggctgacggcttccgggcgatgggtcacggatcgtgagcacggcctccagttc
cgcgccgacacgctccaagtgacgccgccgacggggatcgagggcatcgagcgctacctc
gcctccggtcagatgcgcggcatcggcccgatgatggccaagcgcatcgtcgcccgcttc
ggcgaggcggtgttcgagatcatcgaggccgcgcccgcgcgcctcaccgaggtcgagggc
gtcggccggaagcgcgccgcccgcatcgtcaagggctgggccgagcagaaggccgtgcgg
gagatcatgatcttcctgcacgcccacggcgtcggcaccgcgcgagcgacccggatcttc
cgcacctatggcggagattcgctgaaggtcatggccgaggatccctatcggctcgcccgc
gacatccgtggcatcggcttccgcacggccgacgccattgccctgcgcctcggcctcgcc
cgggacgcgccgcagcggctcgccgccggtgtctcctacgcgctccagacggcgatggat
gagggccattgcgggcttcccgtcgagcggctggtgcgccgggccgccgaccttctcgac
gtcgcgcccgacctcgtccggctcgccgcggcgctcgccctgcgcgagggccgggaggtt
gtcgcggatacgcttcgcggcgagccctgcctgttcctgaagggcctgcacggcgccgag
cgcgccatcgcgatgcggctggccgagcgcgccgccggactgccaccttggcttgcgatc
gacttcgctctggccaagccctgggtcgaggcgaagacgggaaagacgctgtccgcctcg
caggccgaggcggtcgggctggtgctccattcgaagctctgcgttctcaccggcgggccc
ggcgtcggcaagaccagcaccctcgatgcgatccttcgcatcctcaccgccaagggcgtg
cgggtgctgctcgccgcccccaccggccgggcggccaagcgcatggccgagcagaccggg
ctagaagcacgcaccatccaccgtctactggagatcgacccacgcaatggcggctttcag
cgcaacgaggacaacccgctcgattgcgatctgcttgtcatcgacgagacctcaatggtc
gacgtgccgctgatgcatgcgctgctgaaggccgtaccggagcgggcgggcctgatcctc
gtcggcgatgtcgatcagctgccctcggtcgggccgggacagatgctcgccgacgtgatt
gcctccgggaccgtgccggtggcgcgcctcaccgagatcttccgtcaggcggcgcagagc
cggatcgtcgtcaacgcccacagcatcaacaccgggcggatgccgaccgcacccgccaag
ggcgagccgagcgacttctacctcgtcgagatcgaggacgcggacgagggcgtggacacg
ctgatcgaactcgtgacccgccgcatcccccgccgcttcggcctcgatcccacccgggac
atccaagtgctgacgccgatgatccgcggctcgctcggcagtcgcaacctcaacaacgcc
cttcagcgcgtgttgaatccgtcgccatcggcggaggttgagcgcttcggctggcgcttc
gcccccggcgaccgggtgatggagacccgcaacgactacgaccgcgacgtgttcaacggc
gacctcggcatggtcagcgccatcgatgcggatgacgaagcgctcgtggtcgatttcgac
ggtcgcgcggtgatctacccgttcaacgaactcgacacgctggtgccggccgtcgccacg
acgatccacaaggcgcaggggtcggaatatccggccgtggtgattccggtggtgacgcag
caccgcacgatgctggcgcgcaacctgctctataccggcgtcacccgtgggcgtcgcctc
gtcgtgctgatcggccagcgccgggccctcgcgatggcgatccgcgaaggcgcctcgcgg
cgtcgctggaccaaactccgggagtggctggacgccgcctga
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