KEGG   Methanothermobacter sp. CaT2: MTCT_1436
Entry
MTCT_1436         CDS       T04009                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
metc  Methanothermobacter sp. CaT2
Pathway
metc03030  DNA replication
metc03410  Base excision repair
metc03420  Nucleotide excision repair
metc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:metc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MTCT_1436
   03410 Base excision repair
    MTCT_1436
   03420 Nucleotide excision repair
    MTCT_1436
   03430 Mismatch repair
    MTCT_1436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metc03032]
    MTCT_1436
   03400 DNA repair and recombination proteins [BR:metc03400]
    MTCT_1436
Enzymes [BR:metc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MTCT_1436
    6.5.1.6  DNA ligase (ATP or NAD+)
     MTCT_1436
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MTCT_1436
DNA replication proteins [BR:metc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MTCT_1436
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MTCT_1436
DNA repair and recombination proteins [BR:metc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MTCT_1436
   NER (nucleotide excision repair)
    Other NER factors
     MTCT_1436
   MMR (mismatch excision repair)
    Other MMR factors
     MTCT_1436
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: BAM70684
UniProt: T2GKR0
LinkDB
Position
1419888..1421543
AA seq 551 aa
MELAEVYHRLESTTKRLEKTEILAELLRSVDKELLPDVTILMLGRVFPIWSEEELGVGIK
LLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFSQPLTVEFVYSRLKAL
ASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIARAFEVDP
ALVERAHMLTNDLGMVAAVAREEGEPGLGRLNLEPGRPVKPMLAQLASSIESAITELGRA
FCETKYDGIRVQIHRCGDEVSIFTRRLENITAAVPEILEGVEEALPADDYIVEGEIIVTM
DGRPASFQYILQRVRRKYDVDRLTREVPLSLFLFDVLYHRGPLIDEPLWHRREVLESILS
EIPGRVEASRMVDVGPDNLDDALWLFKESIREGHEGIMIKDTEAPYIPGIRGKKMLKFKA
EPETLDLIVVGGTYGRGKRAHLVGSYLLAVRDEKSGELKTIAHVATGLDDQTLQDLSERM
ENLKVERRGRKIRVKPEIILEVAYSEIVRSPEYESGYSLRFPVVKRIRDDLSPDDIDTLG
RVISLFKQGFS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggaacttgcagaggtataccacagacttgaatcaaccacaaaacgccttgaaaagacc
gaaatacttgcggaactcctgaggagtgttgataaggaacttctgcccgatgtaacaata
ctgatgcttggcagagtgtttccaatctggagtgaggaggaacttggggttggcataaag
ctgctcatgaaggcaatatccctggttgtgggggtttcgatggatgaaatcgaggacgaa
ataagggaacagggtgatataggtcttgcaagtgaaaaactattctccagaaaaactcaa
acaacctttttttcacaacccctgacagtggaatttgtttacagcagactgaaggccctg
gcatcagcttctggtgatagggcacagtcaaagaagataaacatacttgttgaggtcctg
tcccaggcaaagccactggaggcacgctatataacaaggacggtccttgaggaactgagg
gttggtgttgcagagggaatcataagggacgccattgcccgggcctttgaggttgacccg
gcactcgttgaaagggcccacatgctcacaaatgacctgggaatggtggccgcagttgca
agggaggagggcgagcctggacttggaagactcaaccttgaaccgggaagacccgtgaaa
ccaatgctggcacagcttgccagcagcatagaatcggccataacggagcttggaagggcc
ttctgtgaaaccaaatatgatggtatacgtgttcagatacacagatgcggggatgaggta
tccatcttcaccaggaggcttgagaacatcaccgcggcggtccccgagatacttgagggt
gttgaggaggcccttccagccgatgactacatagttgagggcgaaataatagtcaccatg
gatgggaggccagcctccttccagtacatactccagcgcgtcagaagaaaatatgatgtg
gataggcttacaagggaggttcccctctcactgttcctctttgatgtcctctaccacaga
ggacccctcatcgatgagcccctctggcacaggagggaggtccttgagtcaatactctca
gaaatacctggaagggttgaggcgagtcgcatggttgatgtgggcccggataacctggat
gatgctttatggctcttcaaggagtcaataagagagggacatgagggtataatgataaag
gatacggaagcgccgtatatacccggtataaggggtaaaaagatgcttaagtttaaggca
gaacccgagaccctggacctcattgtggtcggtggcacctatggcaggggtaaaagggca
catctggtgggatcctatctccttgctgtaagggatgagaagagtggggaactcaagaca
atagcacatgtggccacgggacttgatgaccagacacttcaagacctttctgaaagaatg
gagaatctaaaagttgaaagaaggggtagaaaaatcagggtaaagcctgaaataatactg
gaagtcgcttacagtgaaatagtcaggagcccagaatatgaaagcgggtattccctaagg
ttccctgttgttaaacgtataagagatgatttgagccccgatgatattgatacccttggt
cgcgtgatatcactctttaagcagggtttctcatga

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