Methanofervidicoccus sp. A16: CFE53_04750
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Entry
CFE53_04750 CDS
T06169
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metf03009
]
CFE53_04750
Ribosome biogenesis [BR:
metf03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CFE53_04750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Fer4_RLI
SMC_N
Fer4
AAA_23
Fer4_6
Fer4_10
AAA
AAA_14
AAA_18
RsgA_GTPase
nSTAND3
AAA_29
Fer4_7
Fer4_21
LdpA_Fe-S-bd
Fer4_2
AAA_24
KAP_NTPase
Fer4_9
RuvB_N
VapE-like_dom
NACHT
Fer4_16
DO-GTPase2
Fer4_3
TsaE
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AXI25476
LinkDB
All DBs
Position
1022399..1024174
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AA seq
591 aa
AA seq
DB search
MGGRLAIVDYDRCQPKKCSLECMKYCPGVRMGEETVVIDESTGKPVISEELCSGCGICVK
RCPFGAIAIIGLPEELTEDKIVHSYGKNRFRLYGLVVPRDGVVGILGPNGVGKSTILSIL
SGNLIPNLGNLEEEPSYDKVIKYFSGTELQRYFKDLKEGRIKPVYKPQYVDMLPKVVKGT
VGELLRRVDERGMFDEVVEVLELKNVLNRSLDKLSGGELQRVAIAGACLRDGTIYYFDEP
TSWLDIRQRFNCAKLIRRLSEGKKVVVVEHDLIVLDYLSDLVYIVYGVPSAYGVVSHPKS
TRVGINAYLEGYLKEENIRFRKEPVVFERRPPIDYRERPLLLEYSDIVKNLGDFNLRVEG
GCIYKGEVIGILGPNGIGKTTFVKILAGEMECDEGQVSMGDLRISYKPQYISIEYDGTVE
EFLRGIGNIDSSFYKSEIIKPLGIDRIMDLYIEDLSGGELQRVAIASALMRDADIYLIDE
PSAFLDVEQRLAVSKIIRRIGEEKEAGVFVVDHDILFQDYISDRFMVFSGEPGVYGRGSA
PLDKRTGANMFLKEMGITFRRDPDTGRPRVNKEGSQMDRYQKEIGEYYYIN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtaggttggctatagtggattacgacaggtgtcaacctaagaagtgttccttg
gagtgtatgaagtactgtcctggggttaggatgggggaggagactgtagttatagatgag
agtactggaaaacctgttatctccgaggaactctgtagtggttgtgggatatgtgtaaag
aggtgtccctttggtgctattgcaattataggacttccagaggaacttacagaggataag
attgtccattcctacggtaaaaacagatttagactctacggtttagtggtgccaagggat
ggggttgttggtatccttggaccaaatggagtaggtaaatctacgatactctctatacta
agtgggaaccttatacctaacctaggtaacttagaggaggagccctcctatgataaggtg
ataaagtacttctctggtactgaacttcagaggtactttaaggatctcaaggagggcagg
ataaaacctgtctataaacctcaatatgtggatatgctaccgaaggttgtaaagggtact
gtgggggaactgttgaggagggttgacgagagggggatgttcgatgaggtggttgaggtt
ttggagttgaagaatgttttaaatagatccttggataaactaagtggtggggaacttcag
agggttgcaattgctggggcctgtctaagggacggtactatatactacttcgatgaacct
acatcctggctggatataaggcagaggttcaactgtgcaaaacttataagaaggttgtct
gaggggaagaaagtagttgtagttgagcatgatcttatagttttggattatttgtctgat
ctagtgtatatagtgtatggggttccatctgcctacggggtagtttctcatcctaagagt
acaagggtaggtataaatgcttatttagagggttatctaaaggaggagaacataaggttt
agaaaggaacctgtggtatttgagaggaggccacctattgattacagggagaggccacta
cttttggagtacagtgatatagtgaaaaacttgggagattttaatttgagggttgaaggg
ggttgtatatacaagggagaggttatagggatcttaggtccaaacggtataggtaaaact
acctttgtgaagatacttgcaggggagatggaatgtgatgaggggcaggtgtccatggga
gatctaaggatctcctataaaccacagtatatatctatagagtacgatgggactgttgag
gagtttttaaggggtattggaaatatagattcttcattttataagtctgagattataaag
cccctaggtatagataggattatggatctctatattgaagatctctctggtggggaactt
cagagggttgcaatagcctctgcccttatgagagatgcagatatatatctgatcgatgag
ccctctgccttcttagatgtggagcagaggttggcagtgtctaagattataaggaggata
ggagaggagaaggaagcaggggttttcgttgtggatcacgatatactcttccaggactac
atatcagatagatttatggtgtttagtggggagcctggagtgtatggtagaggtagtgct
ccactggataagaggactggggcgaatatgttccttaaggagatggggattacatttaga
agggatcctgacactggaaggccaagggtgaataaggagggtagtcagatggacaggtat
cagaaggagataggggagtattactatattaattaa
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