Methyloligella sp. GL2: HT051_01115 Help Entry HT051_01115       CDS       T06641                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism metg  Methyloligella sp. GL2 Pathway metg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:metg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     HT051_01115 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:metg03400]     HT051_01115 (ligD) Enzymes [BR:metg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HT051_01115 (ligD) DNA repair and recombination proteins [BR:metg03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      HT051_01115 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  QKP76175 UniProt:  A0A6N0DMY1 LinkDB All DBs Position 236625..239183 Genome browser AA seq 852 aa AA seqDB search MTEASGKASDLLAEYRAKRDFGKTPEPGPERKADSGNSYVIQKHAATRTHFDFRLEHDGV LKSWAVTRGPSTDPSQKRLAVRTEDHPLAYGGFEGVIPKGEYGGGPVMLWDRGSWEPIGD VDKGLKKGHLDFVLHGKRLKGEWHLVRMKPDKRGQKRENWLLIKGSDDAAETGGEPTERF DTSVASGRTMDEIKNGESAVWSSDPSKTPGKTKNSGGKSGAKNGGEKAPSQRASAPDFVE PQLATLVDKVPPGKGWIHEVKFDGYRIEARKDGDRVTLYSRSGLDWTARFPAIAKAFSKL SCKSALIDGEAAFVLPSGLTSFKALQEHIDTDNPAIRYYAFDLLALDGKDLRNEPLSKRK AALKQLFAKKLPERLVYSDDIEGEGDVFFAKACAVGLEGIMCKRASAPYRSGRSKSWLKV KCSHEEEFVIGGYAKSSARGRPFASLLLGTYDGDRLIFAGKVGTGFDTKTLKALAAKFKP LERKTAPFEEVPTADRRDAVWLSPKLVGAVRFTEWTPEGRLRHPSFQGLREDKPAKEVFR DMAAKASEESGKMAKDPRFDGIELSSPDRVLYPEIGLTKLGLAEYYDKVRDAMLPYLVDR PISLVRCPEGHTEECFFQRHAMKGMSAAIKQIAIPGGETKEKYLYIENAEGLFALVQIGV LEIHDWGVSTKALDKPDRLVFDLDPDEGLSLETLKAATIEVRDFLADLGLKSFLKSTGGK GFHVVAPLTPKAGWDEVKAFCKAVADALVTARGDRYTATLSKSAREGKIFVDYLRNQRGS SAIVNFSTRARAGAPVATPLRWDELSGLSQAAAYTVSTLPRRLASLKSDPWEGFFQTRQS ISKKARSTLGLE NT seq 2559 nt NT seq  +upstreamnt  +downstreamnt atgaccgaggcgagcggtaaggcaagcgatcttctcgccgaataccgggccaagcgcgat ttcggcaagacgccggagcccggaccggaacgcaaagccgactccggcaatagctacgtc atccagaaacacgccgcgacccgcacccatttcgatttccgcctggagcatgacggggtg ctgaagagctgggcggtgacccgcggacccagcaccgatccttcgcagaagcgcctggcg gtccgcaccgaagaccacccgctcgcctatggcggcttcgaaggggtgatccctaagggc gaatatggcggcggccctgtgatgctttgggatcgcggcagctgggagccgatcggcgat gtcgataaggggctgaagaagggccatctcgacttcgtgctgcatggcaagcgcctgaag ggcgagtggcatctggtgcggatgaagccggataagcgcgggcagaagcgcgagaactgg ctgctgatcaagggctccgacgatgcggcggagacaggcggcgagccgacggagcgcttt gacacgagcgtcgccagcggccgcacgatggacgagatcaagaacggcgagagcgcggtg tggagctccgatccgtcgaaaacgccgggcaagactaagaatagcggcgggaagagcggc gcgaagaatggcggcgaaaaagcgcccagccaacgcgcgagcgctccggatttcgtcgaa cctcagctcgccacgctggtggacaaggtgccccccggcaaaggctggatccatgaggtg aagttcgacggctaccgcatcgaggcacgcaaagacggcgatcgggtcaccctctatagc cgcagcggcctggactggacggcgcgcttcccggccatcgccaaggcgttttccaagctt tcctgcaaatcggcgctgatcgatggcgaggcggctttcgtgctgccttcagggctgacc agcttcaaggcgctgcaggagcatatcgacaccgacaatccggcgatccgctattacgcc ttcgaccttctggcgctggacggcaaggatctccgcaacgagccgctttcgaaacgcaag gcggcgctgaagcagctgttcgccaagaaactgccggagcggctggtctattccgacgat atcgaaggcgagggcgatgtgttcttcgccaaggcctgcgcggtggggctggaaggcatc atgtgcaagcgggccagtgcgccgtaccgctccggccgctccaagagctggctgaaggtg aagtgcagccatgaggaagagttcgtcatcggcggctatgccaaatccagcgcgcggggg cggcccttcgcttcgctgctgctcggcacctatgacggcgataggctgatcttcgccggc aaggtgggcaccggattcgataccaagacgctgaaagcgctggcggcgaagttcaagccg ctggagcgcaagaccgcgcctttcgaagaggtgccgaccgccgacaggcgcgatgcggtg tggctctccccgaagctggtcggcgcggttcgcttcaccgaatggacaccggaggggcgc ctgcgccatccgagctttcagggcttgcgcgaggacaagccggcgaaagaggtgttccgc gacatggcggccaaggcgtcagaggagagcggcaagatggcgaaggatccgcgtttcgac gggatcgaactctcaagccccgaccgggtgctctatccggagatcggtctcaccaagctg ggcctcgccgaatattacgacaaggttcgggacgcgatgctgccctatctggtcgaccgg ccgatcagcctggtgcgctgcccagaggggcacacggaagagtgcttcttccagcgccac gccatgaaggggatgagcgctgcgataaagcaaatcgccattcccggcggcgagacgaag gagaagtatctctatatcgagaacgccgaaggcctgttcgccctggtgcagatcggggtg ctggagatccacgattggggcgtctcgacaaaggcgctggataagccggaccggctggtc ttcgatctcgatccggatgaaggtctctcgctcgagacgctgaaagcggccaccatcgag gtgcgggatttcctcgccgatctggggctgaaaagcttcctgaaatccaccggcggcaag ggttttcacgtggtggcgccgctcaccccgaaggccggatgggacgaggtgaaggcattc tgcaaggctgtggccgatgcgctggtgaccgcgcgcggcgaccgctacaccgccacgctt tccaagagcgcccgcgagggcaagatcttcgtcgattacctgcgcaatcagcgcggcagc tcggccatcgtcaatttctccacccgggcgcgggcgggcgcgccggtcgctacgccgctg cgctgggacgagctcagcggcctcagccaagcggccgcctatacggtttcgaccctgccg cggcggctggccagcctgaaaagcgacccttgggagggatttttccagacgcggcagtcg attagcaaaaaggcgcgatccacgctcggcctcgaatag

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