Methanothermobacter sp. KEPCO-1: FVF72_01945
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Entry
FVF72_01945 CDS
T06317
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metk03016
]
FVF72_01945
Enzymes [BR:
metk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FVF72_01945
Transfer RNA biogenesis [BR:
metk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FVF72_01945
Prokaryotic type
FVF72_01945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QEF94028
LinkDB
All DBs
Position
complement(376831..377799)
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AA seq
322 aa
AA seq
DB search
MAEFMELKESRTDPSYGCPPHERDIETHISHGVVNLDKPSGPTSHQVDAWVRDMLHAEKV
GHGGTLDPKVTGVLPLGINRATRVMQLLLEAPKEYVCLMRVHREVDEDRIREVLGEFQGK
IFQIPPLKSAVKRELRVRTIYDVSILEIDGKDVLFRIACEAGTYVRKYCHDVGEALGTGA
HMAELRRTRVGPFTEEGLVTLHDLKDAYQFWVEDGDEGFLRECILPMEFAVSHLPRAVIL
DSAVDAVCHGADLARGGIAGLDDNIRKGDTVAVMTLKGELVAVGEALMPSLDIVAADSGL
VIETEKVFMRPGTYPRMWRRSP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattcatggagttaaaggagtcacgcacggacccttcatatgggtgtcctcct
cacgagagggacattgagacccacatatcccacggcgttgttaaccttgataaaccctca
ggtcccacctcccaccaggtggatgcttgggttcgggacatgctacacgcagagaaggtg
gggcatgggggcacactggacccgaaggtcacaggtgttctgcccctgggtataaacagg
gcaacaagggtcatgcagcttctccttgaggcccccaaggaatacgtatgcctcatgagg
gttcacagggaggtggatgaggacaggataagggaggtgctaggggaattccagggaaag
atcttccagatacctcccctcaagtcagctgttaaaagggagctccgtgtaaggacaatc
tacgatgtgagtatactggaaattgatggtaaggatgttctcttcaggatagcctgtgag
gcagggacctacgtgaggaagtactgccatgatgtgggcgaggcccttggtacaggggcc
cacatggctgaactcagacgaacacgtgtgggacccttcacagaggagggcctggtaaca
ctccacgacctcaaggacgcctaccagttctgggttgaggatggggatgagggattcctg
cgtgaatgcatcctccccatggagtttgcagtatcccatctcccccgtgccgtcatcctt
gactctgcagttgatgcagtatgccatggcgctgaccttgcacgtggaggtatagctggc
ctggatgataacataaggaagggcgacacggttgcggtgatgaccctcaagggggaactt
gtggccgttggtgaggcgctgatgccgtcccttgatattgtggccgcagacagcggcctt
gtgattgagacagagaaggtcttcatgaggcccgggacctacccccggatgtggcgccgg
tccccatag
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