KEGG   Methanothermobacter sp. KEPCO-1: FVF72_03715
Entry
FVF72_03715       CDS       T06317                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
metk  Methanothermobacter sp. KEPCO-1
Pathway
metk03030  DNA replication
metk03410  Base excision repair
metk03420  Nucleotide excision repair
metk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:metk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FVF72_03715
   03410 Base excision repair
    FVF72_03715
   03420 Nucleotide excision repair
    FVF72_03715
   03430 Mismatch repair
    FVF72_03715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metk03032]
    FVF72_03715
   03400 DNA repair and recombination proteins [BR:metk03400]
    FVF72_03715
Enzymes [BR:metk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FVF72_03715
    6.5.1.6  DNA ligase (ATP or NAD+)
     FVF72_03715
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FVF72_03715
DNA replication proteins [BR:metk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FVF72_03715
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     FVF72_03715
DNA repair and recombination proteins [BR:metk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FVF72_03715
   NER (nucleotide excision repair)
    Other NER factors
     FVF72_03715
   MMR (mismatch excision repair)
    Other MMR factors
     FVF72_03715
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase FeS_assembly_P
Other DBs
NCBI-ProteinID: QEF95363
UniProt: A0A5B9M872
LinkDB
Position
complement(691266..692921)
AA seq 551 aa
MLYIELAEVYRKLESTTKRLEKTDILAELFSSVERDLLPVVTLLMLGRVFPIWSEEELGV
GIKLLMRAISTVVGVSVDEIEDAMREEGDIGLASEKLFSKKTQTTFFSQPLTVEFVYDKL
RSLASVTGERAQARKIGILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAISRASG
ADPALVERAHMLTNDLGMVAAVAMEDGNSGLEKLNLEPGRPVKPMLAQLAESIESAIEEL
GRAFCETKYDGIRVQIHRKGDEISIFTRRLENITAAVPDILEGVERALPDEDYIVEGEII
VTIEGRPASFQYILQRVRRKYDIERLRRKVPLSLFLFDVLYYGRPLIDEPLRERRRVLES
IISEIPGEIEASRMVDVGPDNVDEALWLFRESIREGHEGIMIKDTESPYIPGIRGKKMLK
FKAEPETLDLIVVGGTYGRGKRAHLIGSYLLAARDDDTGELVTVAHVATGLDDETLQELS
ERMENLAIERKGRKLSVRPEIILEVAYSEIVRSPEYESGYSLRFPVVKRIRDDLSPEDID
TVSRIESMFRA
NT seq 1656 nt   +upstreamnt  +downstreamnt
ttgctctatattgaacttgcagaggtctacagaaaactggaatcaacaacaaagcgccta
gaaaagacagatatccttgcagagctcttcagcagcgttgaaagggaccttttacctgtg
gtgactctcctcatgcttggaagggttttcccaatctggagtgaggaggaactcggggtt
ggcataaaacttctcatgagggcaatatcaactgtcgtgggggtttcggttgatgaaata
gaagatgcaatgagggaggagggggatatcggacttgcgagcgagaaactcttctcaaag
aaaacccagactaccttcttttcgcaaccactcacggttgaatttgtttatgataaactg
cgctcactggcatctgtaacaggtgaaagggctcaggcaagaaaaatagggatactcgtt
gaggtattatcccaggcaaagccccttgaggcacgttacatcaccaggacggtccttgag
gaactccgggtgggggttgcagagggaattataagggatgccatctccagggcctcagga
gccgacccggcgcttgttgagagggcccacatgctcaccaatgacctgggtatggtggct
gcagttgcaatggaggatggtaattcgggccttgaaaaactgaaccttgaacctggaagg
cctgtaaagccaatgcttgcacagcttgctgaaagcatagaatctgcgatagaagaactt
ggcagggcattctgtgagacaaagtatgatgggataagggtccagatacacagaaaggga
gacgagatatccattttcacacgtagacttgaaaacataaccgcggcggtccctgacatc
cttgagggcgttgaaagggcgctcccggatgaagactacatagttgagggtgagatcatc
gttacaattgagggcagacccgcttccttccagtacatactccagagggtcaggagaaag
tatgatatagaacgattgaggaggaaggttcccctttccctcttcctctttgacgtcctc
tattatggaagaccccttatcgacgaaccacttagggagaggaggagggttcttgagtca
atcatctctgagattccaggggagattgaggcgagccggatggttgatgtgggccctgat
aacgttgatgaagccctgtggctcttcagggaatcaataagggagggtcatgagggtata
atgataaaggacacagagtcaccatatataccgggtataaggggtaaaaagatgcttaaa
ttcaaggccgaacccgaaacactggacctcattgtggttggtggcacctatggccgcgga
aaaagggcccaccttattggttcataccttctggctgcaagggatgatgatacaggggag
cttgtgacggtggctcatgttgcaacgggactggatgatgaaaccctccaggaactctca
gagaggatggagaaccttgccattgagcggaagggcaggaaactgagtgtcaggcctgag
ataatacttgaggtggcctacagtgaaatagtccggagccctgagtatgagagcggctac
tcccttcgttttcctgttgtaaaacgcataagggacgatctaagccctgaggacattgat
acggtttcccgtatagagtcaatgttcagggcttga

DBGET integrated database retrieval system