Methylibium sp. Pch-M: C1M51_00620
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Entry
C1M51_00620 CDS
T05827
Name
(GenBank) ATP-dependent DNA ligase
Organism
metp
Methylibium sp. Pch-M
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
DUF3048
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QAZ38045
UniProt:
A0A4P6GRA2
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Position
133331..134959
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AA seq
542 aa
AA seq
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MRDFARLYAALDATTSTHGKLEALTAYFRAAPARHAAWAAYFLAGGKPRQAVPTALLRQL
AAERAGLPAWLFDACYEAVGDLAETIALVLPPPVRDSALGLDDWMRERIGPLRGAPPEQV
RTALFDAWDELDTPGRFLLGKLIGGGFRVGVSRLLLTRALAAVAGLDAKLIAQRLMGWTD
KGAQPTADAYAALLAPEAATGGASPGGQPYPFFLAHTLQAEPRTLGALDDWQAEWKYDGI
RAQLVRRDGQSWLWSRGEELITDRFPELAKLPLPDGTVLDGEIVVWQDGRPSPFAALQRR
IGRKTLGARLLQELPAVLIAYDLLEHEAADRRGEPQHLRRPRLEQLIAATADPALQIAPQ
VQAPDWTALAVLRDTARERGVEGLMLKARESRYGVGRTKDVGVWWKWKVDPYAVDAVLVY
AQAGHGRRASLYTDYTFAVWDDAPDGVPGERRLVPFAKAYSGLSDAEIARVDAVIRKTTI
EKFGPVRSVRPTLVFEIGFEGIARSSRHKAGVAVRFPRILRPRPDKPVEEADTLATLKGL
LA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgacttcgcccggctctacgccgcgctggatgcgaccacctcgacgcacgggaag
cttgaagcgctgacggcctacttccgtgccgcacccgcccgccatgccgcctgggcggcc
tacttcctggccggcggcaagccgcgccaggccgtgccgacggcgctgctgcgtcaactg
gccgccgagcgcgccggcctgccggcctggctgttcgacgcctgctatgaggcggtcggc
gacctggccgagacgatcgcgctcgtgctgccgccgccggtgcgcgacagcgcgctcggc
ctcgacgactggatgcgcgagcgcatcggccccttgcgcggcgcgccgcccgagcaggtg
cgcacggcgctgttcgatgcgtgggacgaactcgacacccccggccgcttcctgctcggc
aagctgatcggcggcggctttcgcgtcggcgtctcgcggctgctgctcacgcgcgcgctg
gccgcggtggccgggctcgacgccaagctcatcgcccaacggctgatgggctggaccgac
aagggcgcccagccgacggccgacgcctacgccgcgctgctggcgccggaggccgcaacc
ggcggcgcctcgcccggcggccagccctacccgttcttcctcgcgcataccctgcaggcc
gagccgcgcacgctcggcgcgctcgacgattggcaggccgagtggaagtacgacggcatc
cgcgcccagctcgtgcggcgcgacgggcaatcctggctctggtcgcgcggcgaggagctg
atcaccgaccgcttccccgagctggcgaagctgcccctgcccgacggcacggtgctcgac
ggcgagatcgtcgtctggcaggacggccgcccctccccgttcgcggccctgcagcggcgc
atcggccgcaagaccctcggagcccgcctgctgcaggagttgccggcggtgctgatcgcc
tacgacctgctggagcacgaggctgccgaccggcgcggcgagccgcagcacctgcggcgc
ccgcgtctggagcaactgatcgccgcgactgccgaccccgcgttgcagatcgcgccccag
gtgcaggcccccgactggacggcgctggccgtgctgcgcgacaccgcccgcgagcgaggc
gtcgaaggcctgatgctgaaggcgcgcgagtcgcgctatggcgtcggccgcaccaaggac
gtcggcgtgtggtggaagtggaaggtcgacccctatgccgtcgacgcggtgctcgtctac
gcccaggccggccacgggcggcgcgcctcgctctacaccgactacaccttcgcggtgtgg
gacgacgcgccggacggtgtgcccggcgagcgccgactggtgccgttcgccaaggcctac
tccggcctgagcgacgccgagatcgcccgcgtcgacgcggtgatccgcaagacgacgatc
gagaagttcgggccggtgcgcagcgtgcggccgacgctggtgttcgagatcggcttcgag
ggcattgcacgctcctcgcgccacaaggccggcgtggcggtgcgcttcccgcgcatcctg
cggccacgccccgacaagccggtcgaggaggccgacacgctcgccacgctgaagggcctg
ctcgcatga
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